Pandoraea pnomenusa DSM 16536: LV28_08925
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Entry
LV28_08925 CDS
T03411
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ppnm03110
]
LV28_08925 (clpA)
Chaperones and folding catalysts [BR:
ppnm03110
]
Heat shock proteins
HSP100
LV28_08925 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
RuvB_N
AAA_14
TniB
nSTAND3
AAA_7
AAA_3
IstB_IS21
TsaE
AAA_18
NACHT
AAA_6
AAA_33
bpMoxR
TIP49
AAA_25
Torsin
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AIU26648
UniProt:
A0A378YL16
LinkDB
All DBs
Position
1178091..1180388
Genome browser
AA seq
765 aa
AA seq
DB search
MIAQELEVSLHMAFMEARQARHEFITVEHLLLALLDNPTAAEVLRACAANLDDLRQNLRN
FIADNTPTVPGSDEVDTQPTLGFQRVIQRAIMHVQSTSNGKKEVTGANVLVAIFGEKDSH
AVYYLQQQGVTRLDVVNFISHGITKTGASGESAKAGEGSAEGEEGANAKESPLAQYTQNL
NQMARDGKIDPLIGRESEVERVVQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTRGEV
PEILQDATVYSLDMGALLAGTKYRGDFEQRLKAVLKELKERSNAILFIDEIHTLIGAGAA
SGGTLDASNLLKPALSSGQLKCIGATTFTEYRGIFEKDAALSRRFQKIDVNEPTVEQTVQ
ILRGLKSRFEEHHGVKYSSSALSAAAELSAKFITDRHLPDKAIDVIDEAGAAQRILPKSK
QKKTIGKGEIEEIVSKIARIPPQSVSADDRGKLQTLDRDLKSVVFGQDPAIDALSAAIKM
SRAGLGKTDKPIGAFLFSGPTGVGKTEVAKQLAFTLGIELIRFDMSEYMERHAVSRLIGA
PPGYVGFDQGGLLTEAVTKKPHCVLLLDEIEKAHPDIFNVLLQVMDHGTLTDNNGRKADF
RNVIIIMTTNAGAETINRASIGFTNERQAGDEMADIKRMFTPEFRNRLDAIISFKPLDEQ
IILRVVDKFLIQLEDQLHEKKVEVVFTDKLRAYLAKKGFDPLMGARPMQRLIQDTIRRAL
ADELLFGRLTSGGRVTVDLDEHDQVQLSFPEDGNTRPEPEAAEVE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgattgcccaggaattggaagtcagcctgcacatggcgtttatggaagcgcgccaggca
cgacacgaattcatcacggtcgagcacctgttgctcgccctcttggataacccgaccgcc
gccgaggtgttgcgcgcgtgcgccgcgaatctcgatgatttgcggcagaacctgcgcaac
ttcatcgccgacaataccccgacggtgcctggcagcgacgaggtcgacacgcagcccacg
cttgggttccagcgcgtgatccagcgcgccatcatgcacgtgcagtccacttccaacggc
aagaaggaagtcacgggcgcgaacgtgctggtcgcgattttcggcgagaaggactcccac
gccgtctactacctgcagcagcagggcgtgacgcggctggacgtcgtcaatttcatttcg
cacggcatcaccaagacgggcgcgtcgggcgagtcggccaaggccggtgaaggcagcgcc
gaaggcgaagagggcgccaacgccaaggaaagcccgctcgcgcagtacacgcagaacctc
aaccagatggcgcgcgatggcaagatcgatccgctcatcggacgcgaatcggaagtcgag
cgcgtggtgcaggtgctgtgccgccgtcgcaagaacaaccccctgctcgtcggcgaagcc
ggcgtgggcaagaccgccatcgccgaagggctcgcctggcgtgtgacgcgcggcgaagtg
cccgagatcctgcaggatgccaccgtctactcgctggacatgggggcgctgctggcaggt
acgaagtatcgcggcgacttcgagcaacgtctgaaggcggtgctcaaggaactcaaggag
cgcagcaacgcgattctgttcatcgacgaaattcatacgctgatcggcgcgggcgccgcg
tcgggcggcacgctcgacgcgtccaacctgctcaagccggcgttgtcgtcggggcagctc
aagtgcatcggcgccacgacctttaccgagtaccgcggcatcttcgagaaggacgccgcg
ctgtcgcgccgtttccagaagatcgatgtgaacgagcccacggtcgagcaaaccgtgcag
atcctgcgcgggctgaagtcgcgcttcgaagagcaccatggcgtgaagtattcgtcgagc
gcgctgtccgccgccgcggagctgtcagccaagttcattaccgaccgtcacctgccggac
aaggccatcgatgtgatcgatgaagccggtgccgcgcagcgcatcctgccgaagtccaag
cagaagaagacgatcggcaagggcgagatcgaggaaatcgtctcgaaaatcgcgcgcatc
ccgccgcagagtgtgtcggcggacgatcgcggcaagcttcagacgctcgaccgcgacctg
aagagcgtggtgttcgggcaggacccggccatcgatgcgctgtccgcggcgatcaagatg
tcgcgcgccgggttgggcaagacggacaagccgatcggtgcgttcctcttctcgggaccg
accggggtcggcaagaccgaagtcgccaagcagcttgcgttcacactgggcatcgagctg
attcgcttcgacatgtcggagtacatggagcgccacgccgtgagccgtctgatcggcgcg
ccgccgggctacgtgggcttcgatcagggcggcctgctgaccgaggccgtgacgaagaag
ccgcactgcgtgctgttgctcgacgaaatcgagaaggcgcacccggacatcttcaacgtg
ctgctccaggtgatggatcacggcacgctgacggacaacaacggccggaaggcggacttc
cgcaacgtcatcatcatcatgacgacgaacgcgggcgccgagacgatcaaccgcgcgagc
atcggcttcacgaacgagcgtcaggccggcgatgaaatggccgacatcaagcgcatgttc
acgcccgagttccgcaaccgcctggacgcgatcatcagcttcaagccgctcgacgagcag
atcatcctgcgcgtcgtcgacaagttcctcatccagctggaagaccagctgcatgagaag
aaggtcgaggtggtgttcaccgacaagctgcgcgcgtatctcgcgaagaagggcttcgat
ccgctcatgggggcacgtccgatgcagcgtctgattcaggacacgattcgtcgtgcgctg
gccgacgaactgctcttcgggcgcctgaccagcggtgggcgcgtgaccgtcgacctggac
gagcacgatcaggtgcagttgtcgttcccggaggacggtaacacgcgtcccgagccggaa
gcggccgaggtcgagtaa
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