Pandoraea pnomenusa DSM 16536: LV28_11890
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Entry
LV28_11890 CDS
T03411
Name
(GenBank) hypothetical protein
KO
K21006
polysaccharide biosynthesis protein PelA
Organism
ppnm
Pandoraea pnomenusa DSM 16536
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_114
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
AIU27138
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All DBs
Position
complement(554506..557277)
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AA seq
923 aa
AA seq
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MAHLLLAAAVAIGTVGVAAAPTAAQAQSTTSLSLASPQSAIPDIALYYGDDIPVDALQAF
DWVVIDPAQASLPDASIAPRTQWFARADARDTTQTPDAFVDARIAPLWQKGFRNFLIDDG
APLTGDAESDARIVARVQAIHARYPDAQLVLRNHLNTAASLAPALAGVLADGLYRRYDAA
AMIFVDTPANVQAAAFAQLDALRNQAHLPTFAMDYCESADLACRRTTARSLDQKGVRAFV
TDPDVQTVGVGRIEVMPRKILMVQTPGDGEPIDLTTGARDISMPLNYLGYDVQYVNANSG
QMPANVRTDRYAGIVVSIDRNVNNAGAWRRWLLARIREGMRVAVIGQFGFPIDQQTAQVL
GLERVAGTVPGAVEPRVVSKSPMIGFEIMPTPDVRDALGVRVGPKGEPLLRLKAGDYTYD
MAGMLPWGGYSLNPYGVTSLAGIEQERWAIQPIDFLRQALALPQMPVPDVTTENGRRLMF
VHVDGDGFASRAEFPGVDYGSMALYEQIFSKYLVPTTLSVIEGEVGPTGLYPKISPRLEE
IARKMFALPNVEIGTHTYSHPFNLEQINQKTGERIYGKANKEWGGDDAFSLDIPNYRFNL
DREIQGSIDYINQRLAPPGKKVVVLQWPGDAQAPAIAIRKAWKAGVLSINGGDTIITKTN
NSWTNIAPYGVAKGLLPTEFQVYAAVMDENVYTNDWLGPYYGYTRVLETFEMTDKPIRFK
AVNLYYHMYSGTKVASLNALKDVYNAVLRQPVFPIFTTEYIRRVLDWRRVAVAREVTADG
APVRWRVRSGADLREMRWPGEGVPVMGTSEDIAGYLPGPGGLYIHMGGDTAEFSIGAKGA
DRTPYISEAAGFVRDFKRTGRNLSFRFGGYYKPFVSVANAAGCRLSVDGVTKGRADGAGR
LRVDVSGVAEKPVTMHVIGVECD
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctcacctgctgctcgccgccgcggtggcgatcggcacggtcggggtcgcggcggcc
ccgacagccgcgcaggcccagtcgacgacatcgttgtccctggcttcgccgcagtcggcc
atcccggacatcgcgttgtactacggcgacgatattcctgtcgacgcgcttcaggcattc
gactgggtcgtgatcgatccggcacaggcatcgttgcccgacgcctcgatcgctccccgc
acccaatggttcgcgcgcgccgacgcgcgcgacacgacgcaaacgcccgacgccttcgtc
gacgcgcgtatcgcgccgctgtggcaaaaaggctttcgcaacttcctgatcgacgacggc
gcaccgctcaccggcgacgccgagagcgatgcacgcatcgtcgcgcgcgtacaagccatt
catgcacgctacccggatgcccagctcgtgctgaggaatcacctgaacacggcggcctcg
ctcgcccccgcgctggccggcgtgctggccgacgggctgtatcgccgttacgacgcggcg
gcgatgatcttcgtcgacacccccgccaacgtgcaggcggcggcgttcgcgcagctcgac
gcgttgcgcaaccaggcgcatctgccgacgttcgccatggactattgcgagagcgccgac
ctcgcctgccgtcgcaccacggcgcgctcgctcgatcagaaaggcgtgcgtgccttcgtc
acggatcccgatgtgcaaaccgtcggcgttggccgtatcgaagtgatgccgcgcaagatc
ctcatggtgcagacgccgggcgacggcgagccgatcgacctgaccaccggtgcgcgcgac
atttcgatgccgctgaactacctcggctacgacgtccagtacgtcaatgccaacagcggc
cagatgccggcgaacgtgcgcaccgaccggtatgcgggcatcgtcgtgtcgatcgaccgc
aacgtgaacaacgccggtgcctggcgccgctggttgctcgcccgcatccgcgaaggcatg
cgtgtggcggtgatcggccagttcggcttccccatcgaccagcagacggcgcaggtgctc
ggactggaacgcgtggcgggcaccgtgccgggcgccgtcgagccccgggtggtaagcaag
tcgccgatgatcggcttcgagatcatgccgacgccggacgtacgcgacgcccttggcgtt
cgtgtcggcccgaagggcgagccgctgcttcgcctcaaggccggcgactacacctacgac
atggccggcatgctgccgtggggcggttactccctcaacccgtacggtgtgacgtcgctc
gcgggcatcgaacaggaacgctgggcgatccagcccatcgacttcctgcgccaggcactc
gcgctgccgcagatgcccgtgcccgacgtgacgaccgaaaacgggcgccgtctaatgttc
gtgcacgtcgacggcgacggcttcgcgtcgcgcgcggagttccccggcgtcgattacggt
tcgatggcgctgtacgagcagatcttctcgaaatacctcgtccccaccacgctgtcggtg
atcgagggggaagtcggacccacgggcctgtacccgaagatctcgccgcgcctggaagag
atcgcgcgcaagatgttcgcgctgcccaacgtcgagatcggcacgcatacctattcccac
ccgttcaacctcgaacagatcaatcagaagactggcgagcgcatctacggcaaggccaac
aaggaatggggcggcgacgacgccttctcgctcgacattcccaactaccggttcaacctc
gatcgcgagatccagggatcgatcgattacatcaaccagcgactggcgcctcccggaaag
aaggtggtggtgctccagtggcccggcgacgcccaggcgccggccatcgccattcgcaag
gcgtggaaggcgggcgtgctgtcgatcaatggcggcgatacgatcatcacgaagacgaac
aacagctggaccaacatcgcgccgtacggcgtggcgaagggcctgctgcccacggaattc
caggtgtacgcggcggtgatggacgagaacgtctacacgaacgactggctcggcccgtat
tacggctacacgcgcgtgctcgagaccttcgagatgaccgacaagccgatccgtttcaag
gccgtcaacctctactaccacatgtactcgggcacgaaggtcgcctcgctcaacgcattg
aaggacgtctacaacgccgtgctccggcaaccggtcttcccgatcttcaccactgaatac
attcggcgcgtgctggattggcgtcgcgtcgcggtcgctcgcgaagtgacggcagacggt
gcccctgtgcgctggcgcgttcgcagcggcgcggatctgcgcgaaatgcgctggccgggc
gaaggcgtgcccgtcatgggcacgtccgaggacatcgcaggctatctgccgggtccgggc
ggcctctacatccacatgggcggcgacacggccgaattctcgatcggcgcgaagggcgcc
gaccgtacgccctacatcagcgaggcggccggattcgtgcgcgacttcaagcgcacgggc
cgcaacctgtcgttccggttcggcgggtactacaagccgttcgtgagcgtcgccaatgcc
gcggggtgccgcctgagcgtcgacggcgtgacgaagggtcgtgccgatggcgccggccgc
ctgcgtgtcgatgtctcgggcgttgccgagaagcccgtcaccatgcatgtcatcggggtg
gaatgtgactga
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