Paenibacillus polygoni: QPK24_05185
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Entry
QPK24_05185 CDS
T09587
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QPK24_05185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_05185
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
QPK24_05185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WIV20112
LinkDB
All DBs
Position
complement(1088088..1088999)
Genome browser
AA seq
303 aa
AA seq
DB search
MHTVWKGAISFGLVHVPVKMFSATEDKDISMRYIHNVCGSPLAYIRKCPSCDIEVKWEEI
TKGYEYEKGKFVLFEKEELEQLSDQANKNIAILDFVNLTDIDPIYFQKTYYLSPDQAGAN
AYQLLMSAMRDTGKIGIAKISIRSKSSLAAIRVLDECLAIETIFYPDEIRPISQVPNLPE
NIQVNDKELTMAKMLIDQLSTPFEPEKYTDDYRLRLLDAIQHKVAGEEFKVAPAKPETNV
VDLMAALQASIEATQPIPTDPGKPPAKKRTRKTAVAAKSEEATPVVTPKPKKRKTAKTKE
SGA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtctggaagggagccatcagcttcggacttgttcatgtccctgtcaaaatg
ttctcggctaccgaagataaagatatctcaatgcgttacattcacaatgtgtgcggaagt
ccgcttgcttatatccgtaaatgtccttcgtgtgatattgaagtgaaatgggaggaaatc
acgaaaggatatgaatatgagaaagggaagttcgtcctttttgaaaaagaggagttagag
caattgtcagatcaggctaataagaatattgccattcttgattttgtaaatttaaccgac
attgaccctatttattttcaaaaaacatattacctgtcccccgatcaagcgggtgctaac
gcctatcagctcttgatgtccgcaatgagagatacaggcaagattggtattgccaaaatc
tcaattcgctcaaaaagtagcctcgctgccatccgtgtattagatgaatgtctggcgatc
gaaacgatcttttatcctgacgaaatccgccccatctctcaggttccgaatcttccggaa
aacatccaagtgaatgataaagaactcacgatggctaaaatgctgatcgatcagttgtct
actccatttgagcctgaaaaatatacggatgactatcgcttgcgcctgcttgatgcgatt
cagcataaagtagcgggagaagaattcaaagtagctcctgctaagccagagacgaatgtt
gttgatctcatggccgctcttcaggcaagcattgaagctacgcagccgataccaaccgac
ccagggaaaccgcctgccaagaaacggacgcgcaaaacggcagttgcagctaaatcagaa
gaagcgactcccgtcgttacgccaaaacctaagaaacgcaaaactgccaaaacgaaagaa
tcaggagcataa
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