KEGG   Pectobacterium polonicum: LW347_16455
Entry
LW347_16455       CDS       T08488                                 
Name
(GenBank) Hcp family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
ppoo  Pectobacterium polonicum
Pathway
ppoo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppoo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LW347_16455
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppoo02044]
    LW347_16455
Secretion system [BR:ppoo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LW347_16455
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: UVO07445
LinkDB
Position
complement(3630974..3631492)
AA seq 172 aa
MPTPCYISIEGKTQGNITAGAFTSDSVGNIYVEGHEDEMLVQEFKHIVTVPTDPQSGQPS
GQRVHKPFKFTVALNKAVPLMYNALASGEMLPTVTLKWYRTSVEGKQEHFFSTILTDATI
VDVDCKMPHCQDPSKLDYTQLIEVSLAYRKIDWEHTVAGTSGSDDWRAPVEA
NT seq 519 nt   +upstreamnt  +downstreamnt
atgccaactccatgctatatcagcatcgaaggtaaaacgcagggcaatatcaccgcgggt
gctttcacgtctgattctgtcggtaacatctatgtggaaggccacgaagacgaaatgctg
gtacaggaattcaaacacattgtcaccgtaccgaccgatccacagtctggtcagccgtcc
ggtcagcgtgtacacaagccgttcaaattcaccgtcgcgctgaacaaagcggttccgctg
atgtacaacgccctggcgtctggcgaaatgctgccaaccgtgaccctgaagtggtaccgc
acgtctgtggaaggtaaacaagagcacttcttctctaccatcctgaccgatgccaccatc
gtggacgtcgactgcaaaatgccacactgccaggacccatcaaaactggactacacccag
ttgatcgaagtgtcactggcctatcgcaaaatcgattgggaacacaccgtcgcaggaact
tccggttccgatgactggcgtgcaccggtcgaagcgtaa

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