KEGG   Pectobacterium polonicum: LW347_16540
Entry
LW347_16540       CDS       T08488                                 
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
  KO
K11901  type VI secretion system protein ImpB
Organism
ppoo  Pectobacterium polonicum
Brite
KEGG Orthology (KO) [BR:ppoo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppoo02044]
    LW347_16540 (tssB)
Secretion system [BR:ppoo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LW347_16540 (tssB)
SSDB
Motif
Pfam: T6SS_VipA
Other DBs
NCBI-ProteinID: UVO07461
LinkDB
Position
complement(3653198..3653701)
AA seq 167 aa
MAKGTDGASVAPKERINIKYVPATGGQQAEIELPLTLMIVGNMKGRTEETPIEERQTVSI
DKNNFTSVMKEANLELNFSVPNRLEEESPDDLPVKLSIGGLNDFSPDRIAQQVPELRKLL
DLREALVALKGPLGNIPSFRNRLQDLLSSEEAREQLLKELDLVKPAE
NT seq 504 nt   +upstreamnt  +downstreamnt
atggcaaaaggaactgatggtgcatctgtcgcaccaaaggaacgtattaatatcaaatat
gttccggccactggtggtcagcaggcggaaatagaattgccgttgacgctgatgatcgtg
ggaaatatgaaagggcgcacagaggaaacgccgatcgaagaacgtcagaccgtatcgatc
gataagaacaactttacctcggtgatgaaagaagcaaatctggaattgaatttcagtgtg
ccaaaccgccttgaagaagaaagtccggacgatctgccagtgaaactgagcatcggcggt
ctgaatgatttctcccctgaccgcattgcccaacaggtgcctgaattacgtaagttgctt
gatttacgtgaagcactggtcgcgctgaaaggccccctcggcaatattccctcattccgt
aatcgtttgcaggatctgttgtccagcgaagaagccagagagcagcttttgaaagagctc
gatctggtaaaacccgccgaataa

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