Pseudodesulfovibrio portus: JCM14722_30390
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Entry
JCM14722_30390 CDS
T08636
Name
(GenBank) glycogen debranching protein
Organism
ppor
Pseudodesulfovibrio portus
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Gene cluster
GFIT
Motif
Pfam:
GDE_C
GDE_N
Glyco_hydro_100
Motif
Other DBs
NCBI-ProteinID:
BDQ35497
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All DBs
Position
complement(3239428..3241383)
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AA seq
651 aa
AA seq
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MIRISRDECVNTETATRKEWLDTNGLGGYASSTVINCHTRKYHGLLVAALKEPRGKFVLL
SKVETSLVHDDLEFNLSTNKYPGVYHPTGHQFVERFEQGLHPSITYRIGDALIQKSMIMV
HGRNTVLLCYELLEGKVKPTLRIRPLLAYRDIHSLTRENMFLRPKSYPEKNGRKIQPYNG
MPPLFMGTNRRSEFFPGPKWKLNFEYLAERERGFDYQEDLFCPGMFETTLQKGKPVIFAA
STDPLGNLERLRKKEITRRETEFAACRDRVKHVQQLKYFSGQFLIRNASDFASVVAGYHW
FGEWGRDTMIALPGLTFHAGRRGLGEEILAAYAALERDGLLPNYLDQHSDHLAYNSVDAS
LWFFWAVQEYLKTGGSRRFVMARVFPALRDIINAHLDGRVPLCALGGAGLLYAGNEHTQL
TWMDAQAYGRPVTPRHGAAVEINALWYNALRFFLELSPEQDELATQAQQAADTLAANFID
KFWNHADNCLNDVVNEHGRDRCIRPNQIFAVSLPHTMLDTGQMRAIISVVQAHLLTPYGL
RTLSPRNPAYSPFYRGDADSRDSAYHQGMVWPWLAGHFGEALLRQAEDRTGAKAFLRKYF
RPILRSFPEDFGIASIPELYTGNPPHMPKGTIAQAWSVAEAIRLNKLLGEK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgattcggatttcccgggacgaatgcgtcaatacggaaacggcgacgcgaaaagaatgg
ctcgataccaacggcctcggcggctacgcctccagcacggtcatcaactgccatacccga
aagtatcacggactcctcgtggcggcgctcaaggagccgcgcggcaagttcgttctcctg
tccaaggtcgagacctcgctggtccacgacgatctggaattcaacctctccaccaacaaa
tacccgggcgtctaccaccccaccggacaccagttcgtggaacggttcgaacagggcctc
cacccgtccatcacctaccgcatcggggacgcccttatccaaaagtccatgatcatggtg
cacggcaggaacaccgtgctgctctgctacgagctgctcgaaggcaaggtcaagcctacc
ctgcgcatccggcccctgctggcctaccgggacatccactccctgaccagggagaacatg
ttcctgcgccccaagtcctacccggaaaagaacggtcgcaagatccagccctacaacggc
atgccgcctctcttcatgggcaccaaccgccgttccgaattcttccccggccccaaatgg
aagctcaatttcgagtacctcgcggaacgcgaaagagggttcgactaccaggaagacctg
ttctgccccggcatgttcgaaacgaccctgcaaaaaggcaagccggtcatcttcgcggcc
tccaccgacccgctgggcaacctcgaacggctgcgcaaaaaggaaatcacccgccgcgag
acggaattcgcggcgtgcagggaccgggtcaagcacgtccagcaactcaaatacttctcc
ggccagttcctgatccgaaacgcttcggacttcgcctccgttgtcgccgggtaccactgg
ttcggcgagtggggacgcgacaccatgatcgccctgcccggcctgacctttcacgccggg
cgcaggggactcggcgaggaaatcctggccgcctacgcagcactggaacgcgacggcctg
ctgcccaactatctcgaccagcactcggaccatctggcatacaactcggtggacgcctcg
ctctggttcttctgggccgtgcaggaatacctcaagaccggagggagcaggcggttcgtc
atggcccgcgtcttccctgccctgcgcgacatcatcaatgcccatctcgacggcagggtg
cccctgtgcgccctgggcggagccggactgctctacgcgggcaacgagcacacccagttg
acctggatggacgcccaggcctacggcaggcccgtcaccccccggcacggggcggcggtg
gaaatcaatgccctgtggtacaacgcgctgcgtttcttccttgagctctcgcccgaacag
gatgagctggccacccaggctcaacaggccgcagacacgctggccgccaacttcatcgac
aaattctggaaccatgccgacaactgcctgaacgacgtcgtcaacgaacacggtcgggac
cggtgcatccggcccaaccagatatttgccgtttccctgccccacaccatgctggacacg
ggacagatgcgggcgatcatcagcgtggtccaggcccatctcctcactccctacggcctg
cgaacgctctcgccaaggaacccggcctattcccccttctacaggggcgatgcggactcc
cgcgattccgcctaccaccagggcatggtctggccatggctggccggccatttcggcgag
gcgctgctccgacaggccgaggacaggaccggggccaaggccttcctgcgcaaatacttc
aggccgatcctgcggtcgttccccgaagacttcggcatcgcctcgatcccggaactgtac
acgggcaacccgccccacatgcccaaggggaccatcgcccaggcctggagcgtggccgaa
gccatccgcctgaacaaactgctcggggagaaatag
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