Physcomitrium patens (spreading earthmoss): 112274127
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Entry
112274127 CDS
T01041
Name
(RefSeq) intraflagellar transport protein 172-like isoform X1
KO
K19676
intraflagellar transport protein 172
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppp03037
]
112274127
Cilium and associated proteins [BR:
ppp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
112274127
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Clathrin
Coatomer_WDAD
ANAPC4_WD40
Sec16_C
HHH_8
WD40_3
SNAP
Motif
Other DBs
NCBI-GeneID:
112274127
NCBI-ProteinID:
XP_024359084
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All DBs
Position
21:5440667..5453917
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AA seq
1551 aa
AA seq
DB search
MGSVHSGICKRALLTIGWWSFWVFDQVEFHDGNGGILQQFDYSTLPMVQEFSTACFNPSG
DTVVLGSFNGFHVFSLTNQQGFWEDVGRIQVDNPYSISALAWKPDGSQLAVGGLCGNVDV
FDACVRKERYKGTFEFTYVTKSQVIVKHLSSGTRIVIRSQYGWEILRINVYHVQYLIAHT
SESLLIGNLETFKLSEVSWRGSGNEKFLVDNPSVCMIHNAGELSLVEYGCNEVLGTCRTE
YLSPFLISVRLNDHLCRLSDPFNEDNKKIAYLIDLQTIRILDLVSGVTAGTLNHDCKIDW
LELNPHATHLLFRDKKQQLHLFNLLTQERITLLCFCSYVQWVPDSDVVVAQNRGNLYVWY
SIKNPEQATIFPIKGEVEGIERAEGRTEVLVDEGSSAVGYVLDEALIEFGMALEALAYDR
AIAILEPLKLAPETEAMWKQLAEAALYHKELAVAERCYAALGDVSKARYVHKVSQAKDEV
VQEVGIDGLDHYIVRAKLALLQHEWKVAETLLLEHGQVGKAIQMYTECHRWEEAISVAES
QNHPDYASLKQGHYEWLLQTAQEEEAGKLKEVDGDVIGAITLFLKGGLPGHAADCVSNHT
LYTFPDDIMESIANALMRANKFEKAGDFLEMLGKYERAKEAYKRGRAYRRAIDLTRRVFP
GEVAALEEEWGGWLVSQNQVDAAINHFIEAGCIEKAIESAMASRQWTKAVQIVDAQDIKI
TIPFCERIARHFEAAKQYAEAEIFFVRAKLASEAVEMYIRANKWDAAHKVAAHHLSEPDA
AALYLQRARQLEAVTHYTDAEKLYIEAQEPDLAIDMYNKARKFDHVIQLVSKYRQDALAE
THLRIAQQLEREGCLRGAEMHYQGAQDWRSSVKMYTSNGLWEDALRVAKLFGGVPGSKQV
AYAWAVSLGGDTGAQLLVKLGLVEQAIEYAMEAGAFEHAFDLCCVSLNHKLPEVQLKYAM
FLEDEGRFRDAEDAFIKVGKPREAIDMYMHQQDWTAALRVADLCDPATISDVLVAQAQDM
MKKEELQKAEALLIRAKRPDVAIIMYRDKMQWDDALRVAEYFLPSKVAEIHSDLAEYMQS
QNGGEDSVESLLARGRALELSQNHSEAIDVYLQLDSSLLADFDKLQQVWSLAISLSKENV
PERLLEVVSTVAGRLIEAELYEVAGELYEDINATKEATNMYIEAGLWEKARAIGASSGAP
LQQHVDDLYKEHLIEKGDAAELVKLGHVSGAVEIYVQLGDWPKVHEVAALLGTDEEKNYS
LRHAKECLQNGKCGEAIDVLSQHGVPLNCPAFELCSFAACKIISAVDSIPQIQFTMQKLR
EILFQIVSSLTLNRALCPEVLTELKRLLIIVNFVTLRYISVAQELQEMQAKLSISLLRYI
GTIPADRAFYEAGMACKQLGWQNMAFVFLNRYLDIVEAIDGEDTSTIDNVNFEISDIPQD
FPIPERHFLEDKQREEVRDWVIQLSMDQQIERALPTRSCEDCGSSIYVASLVCFVCKMES
DMCCVTGYPVASEDRVTCKACKMPANKHNWNVYIHRCQTCPWCMVPQQPFY
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgggatcagttcacagtgggatatgtaaaagagccctattaactattgggtggtggagt
ttctgggtttttgaccaggtggaattccacgatggcaatggtggcatcctgcagcagttt
gattacagcactctcccgatggtgcaagagtttagcacggcgtgtttcaaccccagtgga
gacacggtggttctggggagcttcaatgggttccatgtcttcagtttgacaaaccagcaa
ggattctgggaggatgtggggagaatacaagtggacaatccctattccatctccgccctc
gcttggaaaccagacggcagtcagctggctgtgggagggttgtgtggcaacgtggacgtt
ttcgatgcttgcgttcggaaggagcgttacaaaggcacgtttgagttcacttatgtcacc
aagagccaggtcattgtgaagcacctgtcctcaggaacccgcattgttatccgatcgcaa
tatggttgggaaattctcaggatcaatgtttaccatgttcagtacctcattgctcacact
tccgaatcgctgctcattggcaatctggaaactttcaagttgtccgaggtgtcgtggcgc
ggcagtgggaacgaaaaatttcttgtggacaatccgtcggtatgcatgattcacaacgcc
ggagaactctccttggtggaatatggctgcaacgaggtgctaggcacatgtcggacagaa
tatttgagcccatttttgataagcgttcgcctcaacgatcacctctgtcgcttgtcagat
cctttcaacgaagataacaagaagattgcataccttattgatcttcaaaccattcggata
ttggaccttgtcagcggtgtgactgcgggtacactcaatcatgattgcaagatcgattgg
ctggagcttaaccctcatgcaacccacttgctgtttcgagacaaaaagcagcaacttcat
cttttcaatttacttacgcaggagcgaatcactctattgtgtttttgtagctatgtgcag
tgggtgccagacagtgatgttgttgtcgctcagaatcgaggtaacttgtacgtgtggtac
agcatcaaaaatcccgaacaggcaaccattttcccgattaagggagaagtggaaggcatt
gaaagggcagagggtcgcacagaagtactagtagatgaagggagcagtgcggtgggctat
gtcttagacgaggcactgattgaattcggtatggcgttggaggcccttgcgtatgaccgc
gccatagcaattttagagcctctcaagcttgcgccagaaaccgaggcaatgtggaagcag
ctggctgaggcagcactctatcacaaggagttggcagttgccgagcgatgttatgcagct
cttggagatgtttccaaggctcgttatgtccacaaggtaagtcaagctaaagacgaggtt
gttcaagaagttggaattgatggtctggatcactacattgtgcgtgcaaagcttgctttg
ttgcaacatgagtggaaggtagcagagacgctcctgctagagcatgggcaagtgggcaag
gcgattcagatgtacacagagtgccacagatgggaagaggccataagtgttgcagaaagc
caaaaccatccagattatgcaagcttgaaacaaggccactatgaatggcttctgcaaact
gcccaggaagaagaggctggaaagctgaaggaagtggatggtgatgtaattggcgccatc
acgttgttcttgaaaggcgggcttccaggacatgctgccgattgtgtcagcaatcatact
ttatacacatttccagatgatattatggagtccatagcgaatgctctcatgcgagcaaat
aagtttgagaaagcgggagattttctagagatgttgggtaaatatgaaagagccaaggag
gcttacaagcggggccgtgcgtaccgaagagcaattgatctaacccgtcgagtatttcca
ggggaggtggctgctctggaagaggagtggggtggttggttggtctctcagaatcaggtt
gacgctgctattaatcacttcattgaagctggttgcatcgaaaaggctattgaatccgcc
atggcatcgaggcaatggaccaaggctgtccagatcgttgacgctcaagacataaagatt
acaataccattttgcgaaaggattgcacgccatttcgaagccgcaaagcagtacgcggag
gcagaaatattctttgtgcgtgctaagttggcaagtgaggcagtcgagatgtatattcgt
gctaacaagtgggacgctgcacacaaggtggcagcacatcacttgtcagaaccagacgca
gctgctctgtacctacaacgagcacggcaactggaggccgtcacgcactacacagatgcg
gaaaagctgtatattgaagcccaggagcctgaccttgcaattgatatgtacaataaagca
cggaaatttgaccatgtcatacagctcgtctccaagtaccgccaggatgctctcgcagaa
acacatctccgcatagcgcaacaacttgagagagaaggatgtttgagaggtgctgagatg
cactatcagggtgcgcaagattggaggagcagtgtcaagatgtacacttcaaatgggttg
tgggaagatgctctacgcgtggccaagctttttggtggcgtccctggatccaaacaggtt
gcctacgcatgggcagtgtcattgggtggagatacgggtgcacagttgctggtgaagttg
ggtctagtggagcaagccattgaatatgctatggaggccggagcttttgaacatgcgttc
gacctttgctgcgtttcattgaaccacaagcttccagaggtgcaattgaagtatgccatg
tttttggaagatgaagggcggttccgtgatgctgaggatgcttttattaaagtgggcaag
cctcgcgaggctattgatatgtatatgcaccagcaggactggacagcagctctgcgagtg
gcagatttgtgtgatccagctaccatatccgatgtcttggttgcgcaagcgcaggacatg
atgaagaaggaagaattgcaaaaagccgaagcgcttcttattagggctaaaaggcctgat
gtcgcaatcattatgtaccgcgataagatgcaatgggacgacgctcttcgagttgctgaa
tattttctgccttctaaagtggccgaaatacacagtgatctagcggaatacatgcaaagc
cagaatggaggggaggattctgttgagagccttcttgctcgcggacgggcattggagctc
agtcagaatcactccgaggctattgatgtttaccttcagcttgactcttccctgctagca
gattttgacaagcttcaacaggtgtggagcttggccattagtttgtcaaaagaaaatgtt
ccggaacggctcctcgaggtcgtcagcacagttgctggtcgtttgatagaagcggagttg
tatgaagttgctggtgagctttatgaagacatcaatgccacgaaagaggccacgaacatg
tatattgaagcaggtctgtgggagaaagcaagagccattggtgcaagctctggggcgccg
ttacaacagcacgtggatgatctctacaaggaacacctcattgagaaaggggatgcggct
gaacttgtcaaactaggtcatgtttcaggtgcagtggagatctatgtacaattaggcgac
tggccgaaggtgcacgaggtagcagctctgttgggaactgacgaagagaagaactactct
ctccgtcatgcaaaagaatgcttgcagaatggcaagtgtggtgaagcaatcgacgttctt
tcgcaacatggagtacccttaaactgcccagcttttgaactttgtagttttgctgcttgt
aaaattatatctgctgttgattcgattccccaaatccaatttacaatgcagaagctacgg
gagatcctcttccagattgttagcagcctcaccttaaatagagctctatgtccagaagtt
ctgacggagctcaaaagattgctgatcattgtgaacttcgtcacgttgcgttacatctca
gtcgctcaggagctgcaagagatgcaggcaaaactcagtatttctttgcttcggtacata
ggaacgattcctgcagatagagcgttctatgaggctggaatggcatgcaagcagctagga
tggcaaaacatggcttttgtattcctaaaccgctatttggacatcgtcgaggctattgat
ggtgaggatacgtcaacgatcgacaatgtgaactttgaaattagtgatattccgcaagat
ttccctataccagaaaggcacttcctagaagacaagcaaagagaggaggtccgtgattgg
gtcattcaattgagtatggatcaacagatagagcgagcattgcccacacgatcctgtgaa
gattgcggttcaagcatctacgtggcgagcttggtttgttttgtatgcaagatggagagc
gatatgtgttgtgtgacagggtatccagtagcatccgaagaccgtgtcacatgcaaagct
tgcaagatgcccgcaaacaagcataactggaacgtgtacatccacaggtgccagacgtgt
ccctggtgcatggtccctcaacaaccattctactag
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