Physcomitrium patens (spreading earthmoss): 112279976
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Entry
112279976 CDS
T01041
Name
(RefSeq) chaperone protein ClpC1, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ppp03110
]
112279976
Chaperones and folding catalysts [BR:
ppp03110
]
Heat shock proteins
HSP100
112279976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Sigma54_activat
UVR
nSTAND3
TniB
AAA_18
NACHT
AAA_14
Zeta_toxin
AAA_28
IstB_IS21
AAA_25
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
112279976
NCBI-ProteinID:
XP_024370582
LinkDB
All DBs
Position
3:12823747..12830319
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AA seq
933 aa
AA seq
DB search
MAAVTQSLMVPAVGASHGQIHSSNKSQTPARVGPLGRKKAQIKNSSVPSTRIQSFSGMRK
ASVIDALTVKQGRDFKSTVAAALAVDNQEGTSKGVITAMFERFTEKAIKVIMLAQEEARR
LGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIGRGSGFVAVEIPFTP
RAKRVLELSLEEARQLGHNYIGTEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMV
GESTESVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRT
KNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLDMGLLVAGTKYRGEFEER
LKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIEKDAALERRFQPVLVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQ
YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELDKELRGVTKEKNEAVRGQDFEKAG
ELRDREMELKAQISAITQKGKEQMKAESEAGDTGPTVEESDIQHIVSAWTGIPVEKVSSD
ESDRLLKMEDTLHQRVVGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL
AKALASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVV
LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGGIGF
QLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKLEVKEIADIMLKEVF
ERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLAGEIKEGDS
AIIDVDSEGGVTVLNGTTGSSSSTAIEAPAGIA
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgacacagtccttgatggttccggcagtgggagcatcccatggccaaatt
catagtagtaacaaatctcaaacgccagcaagggtgggtcctctaggcaggaaaaaagcg
cagattaagaattcttcagtgcccagcacaaggattcagtcgttttctggaatgcgtaag
gcttcagtaattgatgctttgactgtgaaacaaggacgggatttcaaatccactgtggca
gctgcgcttgcggtggataatcaagaagggacctccaagggtgtcattacggcaatgttc
gaacgatttaccgagaaggccatcaaggttatcatgttggctcaggaagaagccaggcgt
ttagggcacaactttgttggtacggagcagattctcctaggccttatcggagaggggact
ggaattgctgctaaggtgttgaagtccatgggtgtaaaccttaaggaggctcgtgtggag
gtagagaagatcattggccgtggtagtggttttgtggctgttgagattccgttcacaccc
agagctaagcgagtccttgagctgtcacttgaggaagctaggcagctcggtcacaattat
ataggaaccgagcatctcctcctgggtttgttgcgggagggtgaaggtgttgccgctcgt
gtccttgaaaacctcggagcagaccctagcaatatacggactcaagtaattcggatggtt
ggcgagagtactgagtctgtaggtgctggagtgggtggtggtagcagtggcaataagatg
cctactttggaggaatacggtacaaatttaacgaagcttgctgaagaggggaagttggac
cctgttgttggaagacagccgcaaattgagcgtgtgactcaaattttgggccgaaggaca
aagaataacccttgccttattggagagcctggagttggaaaaactgcaattgctgaagga
ttggctcaacgtattgcaactggcgatgtgcctgaaaccattgagggcaagaaagttatc
accctggatatgggattgttggtagctggtacaaagtacaggggagaatttgaagagagg
cttaagaagttgatggaagagatcaaacaagctgacgacattatccttgtgattgatgaa
gtacatacacttattggtgctggtgctgctgagggtgctattgatgcagctaacatcttg
aagcctgccctcgctcgtggtgaactccagtgtatcggagctaccacattggacgaatat
aggaagcatattgagaaggatgctgcattggaacgtcgattccagcctgtgttggttcca
gaacccactgttgatgagaccattcaaattcttaagggattgagagagagatatgaaatt
catcacaagctgcgttacactgatgaggctttggtagcagcagcacaactttcttatcaa
tacatcagtgatcggtttttgcctgacaaggccatcgacctgattgatgaagctggatca
cgcgtacgtctaaggcacgctcagctacctgaagaagctagagagcttgacaaggagctg
cgcggtgtcaccaaggaaaagaatgaagctgttcgtgggcaggatttcgagaaggctgga
gagttgagggatcgagaaatggagcttaaggctcaaatttctgctattactcagaagggc
aaagagcagatgaaggcagagagtgaggctggtgataccggtcctactgttgaagagtca
gatattcagcatattgtttcagcctggaccggtatccctgtagagaaagtctctagtgat
gagtctgaccgtttgttgaagatggaggatacccttcatcaacgagtcgtcgggcaggac
gaagctgtaaaagccatcagccgtgctattcgcagagctcgtgttggacttaagaatcca
aaccgtcctatcgcaagttttatcttctctggacccactggtgttggaaaatctgagcta
gcgaaggctcttgcctcgtactactttggctcggaagaagctatggttagactcgatatg
tctgagtttatggagagacacactgtatctaaacttattggttctccacccggttatgtc
gggtacagcgaagggggtcagttaacagaagctgttcgcaggaggccgtacacagttgtt
cttttcgatgagattgaaaaggcacatcctgatgtgttcaacatgatgcttcagattttg
gaagacggtcgtctcactgacagcaaaggaagaactgtagattttaagaatacgcttttg
attatgacctcgaacgttggaagcagcgtcattgagaagggtggcggtggcattggtttc
cagttggactacggtgaaaaggattcaagttacaaccgaatcaaaagccttgttaacgag
gaattgaagcaatacttcaggccagagttcttgaataggttggatgagattattgttttc
aggcagttgactaaacttgaagtgaaggaaattgccgacatcatgttgaaggaggtgttc
gagcgattgaagaagaaggaaattgaccttcaggttacggagcggttcagggaccgtgtg
gtcgatgagggttacagtcctagctatggagctagacctctgagacgagcaatcatgagg
ttactagaagatagtatggcagagcgtatgcttgcaggagaaattaaagaaggtgattca
gccattattgatgtggatagtgaaggaggcgtgactgtgttaaatggtacaacaggatca
tcttcaagtacagctatcgaggctcctgcaggcatcgcctaa
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