KEGG   Physcomitrium patens (spreading earthmoss): 112286084
Entry
112286084         CDS       T01041                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03010  Ribosome
ppp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    112286084
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112286084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ppp03011]
    112286084
   04121 Ubiquitin system [BR:ppp04121]
    112286084
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppp04147]
    112286084
Ribosome [BR:ppp03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    112286084
  Archaea
    112286084
Ubiquitin system [BR:ppp04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   112286084
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112286084
  Exosomal proteins of colorectal cancer cells
   112286084
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD DUF2604 IBR OTU1_UBXL Ubiquitin_5 Ogr_Delta
Other DBs
NCBI-GeneID: 112286084
NCBI-ProteinID: XP_024383409
LinkDB
Position
8:9268813..9269742
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKLKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNPECGAGTFMANHFDRHYCGKCGLTYVYQKAGAE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtaaagaccttaacggggaagactattacccttgaggtggagtcttcg
gataccatcgacaatgtaaagacgaaaattcaggataaggaaggaatcccgcccgaccag
cagcggctcatctttgcaggcaagcagctggaggatgggcgcacccttgctgactataac
atccagaaggagtctactcttcatctggtgctccgcctgcgcggtggtgccaagaagagg
aagaaaaaaacctacaccaagcccaagaagctgaaacataagaagaagaaagtcaagctc
gcggtgctgcagttctacaaggtggacgactctgggaaggtgcagcgcctccgcaaggag
tgccccaacccggaatgcggagccggaaccttcatggccaatcacttcgaccgtcactat
tgcggcaagtgtggtctgacttatgtttaccagaaggctggtgcagagtag

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