Physcomitrium patens (spreading earthmoss): 112286084
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Entry
112286084 CDS
T01041
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03010
Ribosome
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
112286084
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112286084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppp03011
]
112286084
04121 Ubiquitin system [BR:
ppp04121
]
112286084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112286084
Ribosome [BR:
ppp03011
]
Ribosomal proteins
Eukaryotes
Small subunit
112286084
Archaea
112286084
Ubiquitin system [BR:
ppp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
112286084
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112286084
Exosomal proteins of colorectal cancer cells
112286084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
TBK1_ULD
DUF2604
IBR
OTU1_UBXL
Ubiquitin_5
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
112286084
NCBI-ProteinID:
XP_024383409
LinkDB
All DBs
Position
8:9268813..9269742
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKLKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNPECGAGTFMANHFDRHYCGKCGLTYVYQKAGAE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtaaagaccttaacggggaagactattacccttgaggtggagtcttcg
gataccatcgacaatgtaaagacgaaaattcaggataaggaaggaatcccgcccgaccag
cagcggctcatctttgcaggcaagcagctggaggatgggcgcacccttgctgactataac
atccagaaggagtctactcttcatctggtgctccgcctgcgcggtggtgccaagaagagg
aagaaaaaaacctacaccaagcccaagaagctgaaacataagaagaagaaagtcaagctc
gcggtgctgcagttctacaaggtggacgactctgggaaggtgcagcgcctccgcaaggag
tgccccaacccggaatgcggagccggaaccttcatggccaatcacttcgaccgtcactat
tgcggcaagtgtggtctgacttatgtttaccagaaggctggtgcagagtag
DBGET
integrated database retrieval system