Physcomitrium patens (spreading earthmoss): 112289942
Help
Entry
112289942 CDS
T01041
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03010
Ribosome
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
112289942
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112289942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppp03011
]
112289942
04121 Ubiquitin system [BR:
ppp04121
]
112289942
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112289942
Ribosome [BR:
ppp03011
]
Ribosomal proteins
Eukaryotes
Small subunit
112289942
Archaea
112289942
Ubiquitin system [BR:
ppp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
112289942
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112289942
Exosomal proteins of colorectal cancer cells
112289942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
IBR
TBK1_ULD
DUF2604
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
112289942
NCBI-ProteinID:
XP_024391470
LinkDB
All DBs
Position
12:complement(4070670..4071610)
Genome browser
AA seq
196 aa
AA seq
DB search
MGWKPNRAIMLGTNPKGVLFPLVSELRSLTPQRSGACRSAAMQIFVKTLTGKTITLEVES
SDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKK
RKKKTYTKPKKLKHKKKKVKLAVLQFYKVDDSGKVQRLRKECPNPDCGAGTFMANHFDRH
YCGKCGLTYVYQKAEA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgggatggaaacctaatcgggctataatgcttggcacaaaccctaagggggtccttttt
cctttggtttccgaactacgttccttgacgccacagcggagcggggcgtgccgatctgca
gccatgcagatcttcgtgaagaccctgacgggcaagactatcaccctcgaggtggagtct
tctgataccatcgacaatgtgaagacgaaaatccaggacaaggagggaattccccccgac
cagcagcggttgatcttcgccggaaagcagctcgaggatggacgtaccctggctgactac
aacatccagaaggagtcgaccctgcacctggtgcttcgcctgcgaggtggagcgaagaag
aggaagaaaaaaacctacacgaagccgaagaaactgaaacacaagaagaagaaagtgaag
ctcgctgtgttgcagttttacaaagtggatgactccggtaaggtgcagcggctgcggaag
gagtgccctaaccctgattgcggggcgggtacgttcatggcgaaccatttcgaccgacac
tactgtgggaagtgtggtctgacctacgtgtaccagaaggccgaggcttaa
DBGET
integrated database retrieval system
