Photobacterium profundum: PBPRB1745
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Entry
PBPRB1745 CDS
T00173
Symbol
VPA1112
Name
(GenBank) putative choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00260
Glycine, serine and threonine metabolism
ppr01100
Metabolic pathways
Module
ppr_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PBPRB1745 (VPA1112)
Enzymes [BR:
ppr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
PBPRB1745 (VPA1112)
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
Pyr_redox_2
FAD_binding_2
Lycopene_cycl
NAD_binding_8
DAO
Motif
Other DBs
NCBI-ProteinID:
CAG23605
UniProt:
Q6LGH5
LinkDB
All DBs
Position
2:complement(1898022..1899728)
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AA seq
568 aa
AA seq
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MNTTYDYIIVGAGSAGCVLADRLSASGEHYILLLEAGGSDRSIFIQMPTALSYPMNSEKY
AWQFETQPEAGLDSRSLHCPRGRVLGGSSSINGMVYVRGHACDYDEWVEQGAEGWSYQEC
LPYFRRAESWIHGEDTYRGGDGPVGTCNGNDMELNPLYQAFIDAGQQAGYPKTDDYNGYQ
QEGFGPMHMTVDKGIRASTSNAYLRRAMKRSNLTVRKGVVTRKVLIKNKQAIGVEIEVGG
KVQSVYANTEVLLSAGSVGSPQLLQLSGIGPKAVLEQAGIAVKHDLPGVGENLQDHLEVY
FQYACHQPITLNSKLGLISKGLIGTRWILQKDGLGATNHFESCAFIRSRAGLKWPNIQYH
FLPAAMRYDGQAAFDGHGFQVHVGPNKPQSRGRIWITSADPHQKPNIEFNYISTEQDKQD
WRDCIRLTREILAQPAMDDYRGEEIQPGADITSDEAMDAWVRQNVESAYHPSCTCKMGSD
NDPMTVLNKDCQVRGIDSLRVIDSSVFPTIPNGNLNAPTIMVAEKAADAILGNTPLSPSN
APTWIAPQWETEQRNGAAQRPMFHQQRK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacgtatgattacatcattgtcggcgcgggatctgcgggctgtgtgttggcc
gaccgtttaagtgcttcgggtgaacattacatcttactgcttgaagcggggggaagtgac
agaagtatctttattcaaatgccaaccgcattgtcatacccaatgaacagtgaaaaatat
gcatggcaattcgaaacacaacctgaggcaggtcttgatagccgcagcctgcattgtccg
cgaggacgtgttctgggtggcagttcttcgatcaacggtatggtgtatgtgcgtggccat
gcttgcgattatgatgagtgggtagagcagggtgctgaaggctggagttaccaagaatgt
ctgccgtattttcgtcgtgctgaatcatggattcatggagaagacacctaccgcggaggt
gatggtcctgttggtacatgcaatggtaacgatatggaactaaatccactatatcaagcg
tttatcgatgctggccaacaagcaggctacccgaaaactgatgactataatggctatcag
caagaaggttttggccctatgcatatgaccgttgataaaggtatacgtgcctctacttca
aatgcttaccttcgccgcgctatgaaacgcagcaacctgacagtgagaaagggtgttgta
actcgtaaggtattgatcaaaaacaaacaggcgataggtgttgagatagaagtcggcggt
aaagtgcagtctgtttatgcgaacaccgaagtgttgttatcggcgggctcagtcggttct
ccgcaacttcttcaattatcgggcattggtcctaaagcagtattagaacaagctggtatt
gctgttaaacatgatttaccgggtgttggtgaaaatctgcaagatcaccttgaagtgtat
ttccaatatgcctgtcaccagcctattaccctgaacagtaaattggggcttattagcaaa
gggttgattggtacgcgttggatattgcaaaaagatggcttgggtgcaaccaaccatttt
gaatcatgcgcctttatccgctctcgtgcaggtctaaaatggccaaatattcagtatcac
ttcttgcctgcagccatgcgatatgacggccaagccgcctttgatggtcatggtttccaa
gtacatgttggtccgaacaaaccgcaaagccgtggccgtatttggataacatcagccgat
ccgcaccaaaagccgaacattgaatttaactatatcagcactgaacaagataaacaggac
tggcgcgattgcatccgtctaacgcgtgaaattctggctcagccagccatggatgattat
cgcggtgaagaaattcaaccaggtgcagatattaccagtgatgaagcgatggatgcttgg
gttcgccaaaatgtggaaagtgcctaccacccgtcttgtacttgtaaaatgggatcagat
aatgatccaatgacagtgctgaataaagattgtcaggtcagaggcatcgactctttacga
gtgatcgattcttcagtattcccaaccatccctaatggcaaccttaatgctccaaccatt
atggtggccgaaaaagcagccgatgccatcttagggaatacaccactctcaccatcaaac
gcgccgacgtggatcgcgccgcaatgggaaacagaacaacgtaacggtgccgctcaacgc
cctatgtttcaccaacaaagaaaataa
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