Pseudomonas protegens CHA0: PFLCHA0_c01750
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Entry
PFLCHA0_c01750 CDS
T02671
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprc03021
]
PFLCHA0_c01750
Transcription machinery [BR:
pprc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLCHA0_c01750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_WhiA
PSII_Pbs27
Motif
Other DBs
NCBI-ProteinID:
AGL81977
UniProt:
A0A2C9EE94
LinkDB
All DBs
Position
214922..215503
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AA seq
193 aa
AA seq
DB search
MSAAQSTSDASSDETLLARYRAGDPAAFEVLYQRHRQGLYRFVLSLCGKAELADEVYQET
WLSLIRSTSQPQGRASFRTWLYQIARNRLIDHWRKHGQRNPLHDSYDEQLHGEADQAPGP
EQQLSLCRDQQRIEAALQDLPEDQREVFLLRAHGDLELPEIASLTQAPLETVKSRFRYAL
KKLRRLLAEEVLT
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcccaatccaccagcgacgccagcagcgatgaaacgctgctggcgcgttac
cgtgccggagaccccgcggccttcgaggtgctttaccagcgccatcgccagggcttgtat
cgctttgtgctgagcctgtgtggcaaggccgagctggcggatgaggtctaccaggaaacc
tggctcagcctgatccgcagcaccagccagccccagggccgggccagctttcggacctgg
ctgtaccagattgcccgcaaccgcttgatcgaccactggcgcaagcacggccagcgcaac
ccgttgcacgacagctatgacgaacaactgcacggtgaagccgaccaagcccccggcccc
gaacagcaactgagcctgtgccgcgaccagcagcgtatcgaagccgccctgcaggacctg
cccgaagaccagcgcgaggtgttcttgctgcgggcccacggcgacctggaactgccagaa
atcgccagcctgacccaggctcccctggaaacggtgaaaagccgtttccgctatgcgttg
aaaaaattgcgtcggctcctggccgaggaggtactcacatga
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