Pseudomonas protegens CHA0: PFLCHA0_c33270
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Entry
PFLCHA0_c33270 CDS
T02671
Symbol
rnhA
Name
(GenBank) ribonuclease H
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFLCHA0_c33270 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprc03032
]
PFLCHA0_c33270 (rnhA)
Enzymes [BR:
pprc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
PFLCHA0_c33270 (rnhA)
DNA replication proteins [BR:
pprc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
PFLCHA0_c33270 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
PFLCHA0_c33270 (rnhA)
Elongation factors (archaeal)
PFLCHA0_c33270 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
JHD
DUF3679
T2SS_PulS_OutS
IFT46_B_C
Motif
Other DBs
NCBI-ProteinID:
AGL85097
UniProt:
A0A2C9EN72
LinkDB
All DBs
Position
complement(3723711..3724163)
Genome browser
AA seq
150 aa
AA seq
DB search
MSDSVEIFTDGACKGNPGPGGWGALLVCKGVEKELWGGEANTTNNRMELMAAIRGLEELK
RQCDVQLVTDSQYVMKGINEWMANWKKRGWKTAAKEPVKNADLWQQLDEQVNRHNVTWKW
VRGHTGHHGNERADQLANRGVDEVRGYKQP
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagcgtagaaatctttaccgacggtgcctgcaagggcaatcccggccccggt
ggctggggcgcgctgctggtgtgcaagggcgtcgaaaaggagctctggggcggcgaagcc
aacaccaccaacaaccgtatggagctgatggcggcgatccgcggcctggaagagctcaag
cgccagtgcgatgtgcaactggtcaccgactcgcagtatgtgatgaagggcatcaacgag
tggatggccaactggaagaagcgcggctggaagaccgccgccaaggagccggtgaagaat
gccgacctgtggcagcagctcgacgaacaggtcaaccgccacaacgtcacctggaaatgg
gtgcgcggccacaccggccatcacggcaacgagcgggccgaccagttggccaaccgtggc
gtcgacgaggtccgcggctacaagcagccctga
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