Pseudomonas protegens Cab57: PPC_4577
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Entry
PPC_4577 CDS
T03613
Name
(GenBank) AraC family transcriptional regulator
Organism
ppro
Pseudomonas protegens Cab57
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Gene cluster
GFIT
Motif
Pfam:
Arabinose_bd
HTH_18
HTH_AraC
HTH_38
HTH_23
Sigma70_r4_2
SurA_N
HTH_10
HTH_11
HTH_DeoR
HTH_Tnp_ISL3
HTH_30
Sigma70_r4
HTH_28
HTH_20
HTH_IclR
UPF0175
TnsD
Motif
Other DBs
NCBI-ProteinID:
BAO63924
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Position
5111563..5112561
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AA seq
332 aa
AA seq
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MRERTIASHFARAALGGARRHGYDYAPLLHQLGISPELLNQPKARIAPEQFTRLLQQLWL
ELDDEYLGFGHGPSKRGTFAMMCHALIHCRTLEKALHRGLLFYSLFPEAPRLSLTREGEM
ARLSLDDSELWDPEHFLSESLLVIWHRLGSWLIGQRIRLEQACFSYPKPDHGAEYDLLFP
CPLLFNQERSSLLFHSRYLGMPLLQDERTLKHFLERSPADLLSRPDEGDSLSSQLRRLLS
RDREHWPDLESVAQHLHVSPQTLRRHLREEGSSFQELKDELRRDIAIYHLGRADLSLQQI
AEQLGFSEPSAFHRAFKKWTGLTPGAYRAREQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaacgcaccatcgccagccactttgcccgtgccgccctgggcggagcacgccgg
cacggctatgactacgcgcccctgctgcatcagttgggcatcagccccgagctgctgaac
caacccaaggcccgtatcgcccccgagcaattcacccgcctgttgcagcaactgtggctg
gagctggatgacgagtacctcgggttcggccatggccccagcaagcgcgggaccttcgcc
atgatgtgccacgcgctgatccactgccgtaccttggaaaaagcactccatcgcggctta
ttattttatagcctgtttccggaagccccgcgtctgagtctgacgcgtgaaggagaaatg
gcccggctgagcctggatgattccgagctatgggatcccgagcactttctcagcgagagc
ctgctggtgatctggcatcgcctcggcagttggttgatcggccagcgcatccgcctggag
caggcctgcttcagctaccccaaacccgatcacggcgcggaatacgacctgcttttccct
tgcccgctgctgttcaaccaggagcgcagcagcctgctgttccacagtcgctacctgggc
atgccgctgctgcaggacgaacgcaccctcaaacacttcctcgaacgctctcccgccgac
ctgttgtcgcgcccggatgaaggcgacagcctcagcagccagctgcgccgcctgctcagt
cgcgaccgcgagcactggcccgacctggaaagcgtcgcccagcacctgcacgtcagcccg
cagaccctgcgccggcatctacgcgaagaaggttcgagctttcaggagctgaaggatgag
ctgcgccgcgacattgccatctaccacctcggccgggccgacctgtcattgcaacagatc
gccgaacaactgggcttttccgagccctcggcctttcaccgggcgttcaagaaatggacc
ggcctgaccccgggcgcctaccgcgcccgggaacagtag
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