Pseudomonas protegens Cab57: PPC_5418
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Entry
PPC_5418 CDS
T03613
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
PPC_5418
Enzymes [BR:
ppro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PPC_5418
Peptidoglycan biosynthesis and degradation proteins [BR:
ppro01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PPC_5418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
BAO64765
LinkDB
All DBs
Position
complement(6000901..6001899)
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AA seq
332 aa
AA seq
DB search
MLAMPIRKPLKLVAFAALSLLVVSCSTSRSPQQKSSTAVRSMPGLDVNRAHKDGAPWWDV
DVSRIPDATPTLHTGPYKANPYTVLGKTYFPIQESKNYVASGTASWYGTKFHGQNTANGE
VYDLYGMSAAHKTLPLPSYVKVTNLDNNRSVILRVNDRGPFYSDRIIDLSYAAAKKLGYA
ETGTARVKVEGIDPQQWWAQRGRPAPLMLNEPQVAQNSAPVVTASAGTVEQWTPPPQQHA
AAVVPVQVKNTAAASGQYLQVGAFANPDAAELLRSKLSGMVSAPVFISSIVRNQQTLHRV
RLGPFGTPGEAQQAQNSVRLANLGQASVVSAE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaatgccaattcgcaaacccctgaagctggtggcttttgccgcgttgtccttg
ctggtggtcagttgctcgacgagtcgctcgccgcagcagaaatcttccaccgctgtgcgt
tccatgccgggcctggacgtcaaccgcgcccacaaggatggcgcgccgtggtgggatgtc
gacgtttcgcgcatccccgatgcgaccccgaccctgcataccggcccgtacaaggccaac
ccctacacggtactgggcaagacctatttccccatccaggaatcgaagaactacgtggcc
tccggcacggcgtcctggtatggcaccaagttccacggccagaacaccgccaatggcgag
gtctatgacctgtacggcatgagtgccgcgcacaagactctgccgttgcccagttacgtg
aaggtcaccaacctggacaacaatcgcagcgtgatcctgcgggtcaacgaccgtgggccg
ttctattccgaccgcatcatcgacctctcctacgccgcggccaagaagctcggctatgcc
gagaccggcaccgcccgggtcaaggtcgagggcatcgatccgcagcaatggtgggctcag
cgtggccgtccggcgccgctgatgctcaacgagccgcaagtggcccagaatagcgcgccg
gtggtcacggcctcggccggcactgtcgaacaatggaccccgccgccccagcagcacgcg
gcggctgtggttcccgtacaagtgaaaaacacggcagcagcttctggccagtatctgcag
gtgggcgccttcgccaaccctgacgctgccgagctgttgaggtcgaaattgagtggcatg
gtgagcgccccggtgttcatcagctcgatcgtccgcaatcaacagacgctgcatcgagtg
cgcctggggccattcggcacgccgggtgaggcccagcaagcgcagaacagtgtgcgcctg
gcgaaccttgggcaggccagcgtggtctctgccgagtaa
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