Pseudomonas protegens Cab57: PPC_6036
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Entry
PPC_6036 CDS
T03613
Symbol
tssK
Name
(GenBank) type VI secretion protein TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPC_6036 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppro02044
]
PPC_6036 (tssK)
Secretion system [BR:
ppro02044
]
Type VI secretion system
Imp/Vas secretion system core components
PPC_6036 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
BAO65383
LinkDB
All DBs
Position
complement(6662724..6664058)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSTGAWGFSELRIDQGLLAQGKL
AIVSARGLLPDGTPFNIPHDDLAPSPLCIDDNLRDGLVYLALPLKRAGARDTVDEGEELG
GARYLSQVREVRDDNAPFENRAPVAVGSRALRLLTAQDGLSDYAAIGVVRVKEKRADRAL
VLDDSYIPPVLDVAASKPLSAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLVNHLSQISPLHPERLFSELVSLAGEFSTFTHSARRPEQYPQYQHDELAMSFAP
VMQALREALSMLIDSKATPIPIVEKAYGVHVAMLADRTLLENASFILVVRADVPGETLRG
RFAQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSEHWKQLVH
SGGFAFHVAGEFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcattggaacccagcacttc
cagcagcatgaccgttacctggaaaacctcatcgacgcccgcagccgcccgctgtcgacg
ggagcctgggggttctccgagctgcgtatcgatcagggcctgctggcccagggcaagctg
gccatcgttagcgcccgtggcctgctgcccgacggcacgccgttcaacattccccatgac
gacctggcgcccagcccgttgtgcatcgacgacaacctgcgtgacggcctggtgtacctg
gcgctgcccctcaagcgcgccggcgcccgggacaccgtggacgagggcgaagagctgggc
ggtgcccgctacctgagccaggtgcgcgaggtgcgtgacgacaacgcaccgttcgagaac
cgcgcgccggtggccgtgggctctcgggccctgcgcctgctcaccgcccaggacggcctc
agcgactacgccgccattggcgtggtgcgggtcaaggagaaacgcgccgatcgtgctctg
gtgctggacgacagctacattccgccggtgctggacgtggccgcgtccaagccgttgagc
gcctttcgcagcgaactgctgggcctgctgcaccagcgcggcgaggccctggccgggcgc
gtggtggcatcgggcgcggggggcgcttcggaaatcgccgacttcatgctcctgcaactg
gtgaaccgcgcccagcccctggtcaaccacctgagccagatcagcccgctgcaccccgag
cgcctgttcagcgagctggtgagcctggccggcgagttctcgaccttcacccacagcgcc
cggcgccctgagcaatacccgcagtaccagcacgatgagctggccatgagtttcgccccg
gtgatgcaggccctgcgtgaagcgctgtcgatgctgatcgacagcaaggcaacgccgatc
cccatcgtcgagaaagcctacggcgtacacgtggcgatgctggccgaccgcaccctgctg
gagaacgccagcttcatcctggtggtgcgtgccgacgtgccgggcgaaaccctgcgcggg
cgctttgcccagcagagcaaggtgggttcggtggagcacatccgcgacctggtcaacctg
cagctgccgggcatcggcctgctgccgctgccggtggcgccgcggcaactgccgtaccac
gcaggctcgacctactacgagctggaccgtggcagcgagcactggaaacaactggttcac
tccggcggcttcgcgttccacgtcgcgggagaattcccgggcttgaacctggccttctgg
gccattcgaggataa
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