Paenibacillus protaetiae: ET464_00605
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Entry
ET464_00605 CDS
T06829
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pprt
Paenibacillus protaetiae
Pathway
pprt03030
DNA replication
pprt03430
Mismatch repair
pprt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ET464_00605
03430 Mismatch repair
ET464_00605
03440 Homologous recombination
ET464_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprt03032
]
ET464_00605
03400 DNA repair and recombination proteins [BR:
pprt03400
]
ET464_00605
Enzymes [BR:
pprt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ET464_00605
DNA replication proteins [BR:
pprt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ET464_00605
DNA repair and recombination proteins [BR:
pprt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ET464_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QAY65109
UniProt:
A0A4P6ETZ2
LinkDB
All DBs
Position
148117..151878
Genome browser
AA seq
1253 aa
AA seq
DB search
MNGNGSAFVHLHVHSEYSLLDGAARIKDLASRASELGMKALALTDHGVMYGAIPFYRACL
DKGIKPIIGCEMYITAGSRLEKASRKEQPIYHLILLAKDREGYRNLMKLNSIGHLEGFHY
KPRIDMEVLAAHSKGLVALSSCLKGEVSQHLLHDRPEAAREAALRYRDIFGDDYYLEIQD
HGMLEQKKVAAAMITLAKETGIKLAATNDVHYLQQEDAAVQDVLICIGTGKTTDDDNRMK
MSTDQLYLKSADEMALLFRHVPEALANTLEIADKCRLELEFGRAALPVFRPVPEQMSSSV
YLAELCRDGLISRYAGLPEWSADESFRKKAEERLRYELSVIDSMGFSDYFLIVWDFVRFA
HEQGIRTGPGRGSSAGSLVAYTLRITDVDPLKYKLLFERFLNPERITMPDIDIDFNDERR
DEVIAYVAAKYGEEHVAQIITFGTMAAKAAIRDVGRAMNVPYAEVDRAAKLIPNQLHITL
EEALRSSQELRDACERSPKTGEMVRMALKVEGMPRHASTHAAGVVIAKEPLTHYVPLQSG
GERSALTQYTMEHLEAIGLLKMDFLGLRTLSILERTLRWIGEQYGKQIDFRTIADDDPQT
YAMLGRGETTGIFQLESAGVRRVLKEMRPSSFEDIVSVLALYRPGPMEFIPKYIQSKHGL
APVDYPHPSLEPILADTYGIIVYQEQIMQIASSMAGFSLGEADLLRRAVSKKKREVLDEE
RAHFAAGSVRQGYTEEEANAVYDMIVRFADYGFPRAHAAAYGVLAFQTAWLKAHYPVPFM
ASMLASVTGNQRKTAEYVEECKRMGIAVLPPDVNESGVTFTPVEGAVRFGLAAVKNVGTQ
AIEAIQRERAERPFASMLDLCRRVDLRVVNKRVLESLIQAGACDSLPGHRAQLLAGLEET
VEAAVKWRKEREELQIELFGFDEVQNWDVELPDIPPFTPAQQLELEWELLGMYLSGHPLD
EAEQTIAPLGLDRLVELNDMPDGSSAVVGVMVASLKPFTNKKGNAMAFIEVEDRVMRVEG
VVFPAVWKRHADKLQKGGLVLLQVVVQQQEDDYKLLIDDAAALGGSAEELAREARRLQRQ
AQMRAQRQAGPAAPGPGPRSAGAGGSAPPAGSAAARHERAAASRPTPAAAVPPARPAGLA
APHAPAAQQPPGGGTPLRASGASRDASAARSGMPAARKQQRVYIKITAGREQPHVLEQLK
KLLSGSPGQLGTVLFYEREQKTIALSDSYNVKPSQELIRAIEALLGEGTAVVK
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaacggatccgcatttgtgcatttgcacgtgcatagtgaatacagcctgctg
gacggagcggcgcgtattaaagatttggcgtcaagagcgtcagagcttgggatgaaggcg
ctcgctttgacggatcacggcgtaatgtacggcgcaattccgttttaccgggcatgtctg
gataaagggataaagccgatcatcggctgcgagatgtatatcacggcaggctccaggctg
gagaaagcaagccgcaaggagcagcctatctatcatttgatcctgctggccaaagataga
gaaggctaccgcaatttaatgaagttaaactccatcggccatttggaaggcttccattac
aagcctcggattgatatggaggtgctggccgcccactcaaaggggctcgttgcactcagc
tcctgtctgaaaggcgaagtgtcgcagcatttgctgcatgaccgccctgaggcagcgcgc
gaagcggcgctccgctaccgggatatatttggcgacgattattatctggaaatccaggat
cacggtatgctggagcaaaaaaaagtcgcagcggccatgattaccctggcgaaggaaacg
ggcatcaagctggctgcaacgaatgatgtccattatttgcagcaggaggacgcagcggtc
caggatgtgctgatttgcatcggcaccggcaaaacgaccgatgacgacaaccggatgaaa
atgtcgacggaccagctttatttaaaaagcgcggatgaaatggcgctgctgttccgccat
gtgccggaagcactcgcaaatacgctcgaaattgcggacaagtgccggctggagctggaa
tttggtcgcgccgcgctgccggtgttccggccggtgccggagcaaatgtcgtcctcggtt
tatttggccgagctttgccgggacggtctcatttcccgttatgcggggctgccggaatgg
agcgcggacgaatcattccgcaagaaggcggaggagcggctccggtacgagctttccgtc
atcgacagcatgggattcagcgattattttttgatcgtatgggatttcgtccggtttgcc
catgagcagggcatccgcaccggcccgggacggggctcgtcggcgggcagccttgttgcc
tatacgctgcggattaccgacgtagacccgctgaaatacaagctgctgtttgaacggttc
ctgaacccggaacggattacgatgcccgatatcgacatcgacttcaacgacgagcggcgc
gacgaggtcattgcttatgtagccgctaaatacggggaagagcatgtcgcgcaaattatt
acgttcggaacgatggcggccaaggcggccatccgcgatgtcggccgggcgatgaatgtg
ccgtatgcggaagtggaccgggcggcgaagcttatcccgaaccagcttcatattacgctg
gaggaagcgctgcggtcgagccaggagctgcgggacgcgtgcgagcgttcgccgaaaaca
ggcgaaatggtgcgaatggcgctgaaggtggaggggatgccccgccatgcttcgacacat
gcggcgggcgttgtaatcgccaaggagccgcttacccattatgtgccgctgcagtcaggc
ggcgagcgttcggcgctgacgcaatatacgatggagcatctggaagcgatcgggctgctg
aagatggacttccttggcttgcggacgctgtcgattctggagcggacgctacgctggatc
ggcgagcagtacggcaagcagatcgacttccgcacgatcgcagatgacgatccgcaaacg
tacgccatgctgggccgcggggaaacaaccggcatcttccagctggagtccgcaggcgtg
cgcagagtgctcaaagagatgcgtccttccagctttgaagatatcgtatcggtgcttgcg
ttgtatcgtccgggcccgatggaatttatacccaagtatatccaaagcaagcacggcctt
gcgccggtggactatcctcatccgtcactggagccgattctggcggatacgtacggcatt
atcgtgtaccaggagcaaattatgcagattgcttcttcgatggcgggtttttcgctgggc
gaagccgacttgctgcgccgcgccgtctccaagaagaaacgcgaggtgctggacgaggag
cgggcgcattttgcagcgggcagcgtccgtcaaggctatacggaggaagaggcgaacgcc
gtatacgatatgattgtccggttcgccgattacggcttcccgcgggcgcatgcggccgct
tatggcgtgctggcgtttcagacggcctggctgaaggcacattacccggttccgtttatg
gcgtccatgctggcgtccgttaccggcaaccagcggaaaacggcggaatacgtcgaagaa
tgcaaacggatgggcattgccgtgctgccgccggatgtgaacgaaagcggcgtgacgttt
acgccggtggaaggagcggtccggttcgggctggctgcggtcaaaaacgtgggcacgcaa
gccattgaagcgattcagcgggagcgcgcggaacggccgtttgcgagcatgcttgattta
tgccgccgcgtagatttgcgggtggtgaacaagcgcgtgctggaatcgctgatccaggcc
ggggcttgcgattcgctgccgggccaccgggcgcagctgcttgccggactggaagagacg
gtggaggctgcggtcaaatggcgcaaggagcgggaagagctgcagatcgagctgtttggg
tttgacgaggtgcagaactgggacgtcgagctgccggatattccgccgtttacgccggcg
cagcagctggagctcgaatgggagctgctgggcatgtatttatccggccatccgctggat
gaagccgagcaaacgattgccccgcttgggcttgaccggctcgtcgagctgaacgacatg
ccggacggcagctctgccgttgtaggcgtcatggtggcttcgctcaagccgtttacgaat
aaaaaagggaacgcaatggcgtttatcgaggtggaagatcgggtgatgcgcgtggaaggc
gtcgtgttccccgccgtctggaagcggcatgccgacaagctgcaaaaaggcgggcttgtc
ttgctgcaggtggttgttcagcagcaggaggacgactacaagctgctgattgacgacgcc
gccgcgcttggcggctcggcggaggagctggcgcgcgaggcgcgccgcctgcagcgccag
gcgcaaatgcgcgcgcagcgccaggccggaccggcagcgcccggtccggggccgcgcagc
gccggcgccggcggctccgccccgccggcgggcagcgcagctgcgcggcatgagcgggcc
gcggccagccggcccaccccagcggcggcggtgccgcccgcgcgtccggccggcctggcc
gcgccgcatgcgccggccgcgcagcagccgcccggcggcggaacgccgctacgcgcgtcc
ggcgccagccgggatgcctctgccgcgcgtagcggcatgcccgctgcccgcaagcagcag
cgggtttatattaaaataacggccgggcgcgagcagccgcatgtgctggagcagctgaag
aagctgctgtccggcagtccgggtcagctcggcaccgtgttgttttacgaacgggagcaa
aaaacaatcgcgttaagcgacagctataacgtcaagccttcgcaggagctgatccgcgcc
atcgaagcgctgcttggtgaaggaactgccgttgtcaaataa
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