KEGG   Pan paniscus (bonobo): 100970502
Entry
100970502         CDS       T02283                                 

Gene name
TUBA1C
Definition
(RefSeq) tubulin alpha 1c
  KO
K07374  tubulin alpha
Organism
pps  Pan paniscus (bonobo)
Pathway
pps04145  Phagosome
pps04210  Apoptosis
pps04530  Tight junction
pps04540  Gap junction
pps05010  Alzheimer disease
pps05012  Parkinson disease
pps05014  Amyotrophic lateral sclerosis
pps05016  Huntington disease
pps05020  Prion disease
pps05022  Pathways of neurodegeneration - multiple diseases
pps05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100970502 (TUBA1C)
  09143 Cell growth and death
   04210 Apoptosis
    100970502 (TUBA1C)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100970502 (TUBA1C)
   04540 Gap junction
    100970502 (TUBA1C)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100970502 (TUBA1C)
   05012 Parkinson disease
    100970502 (TUBA1C)
   05014 Amyotrophic lateral sclerosis
    100970502 (TUBA1C)
   05016 Huntington disease
    100970502 (TUBA1C)
   05020 Prion disease
    100970502 (TUBA1C)
   05022 Pathways of neurodegeneration - multiple diseases
    100970502 (TUBA1C)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100970502 (TUBA1C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100970502 (TUBA1C)
   03036 Chromosome and associated proteins [BR:pps03036]
    100970502 (TUBA1C)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pps04812]
    100970502 (TUBA1C)
   04147 Exosome [BR:pps04147]
    100970502 (TUBA1C)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100970502 (TUBA1C)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100970502 (TUBA1C)
Cytoskeleton proteins [BR:pps04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100970502 (TUBA1C)
Exosome [BR:pps04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100970502 (TUBA1C)
  Exosomal proteins of other body fluids (saliva and urine)
   100970502 (TUBA1C)
  Exosomal proteins of colorectal cancer cells
   100970502 (TUBA1C)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100970502
NCBI-ProteinID: XP_003825879
UniProt: A0A2R9ASI2
LinkDB
Position
12
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSADGEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgttggccaggctggtgtccagattggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcccgatggccagatgccaagtgacaag
accattgggggaggagatgattccttcaacaccttcttcagtgagacgggtgctggcaag
catgtgccccgggcagtgtttgtagacttggaacccacagtcattgatgaagttcgcact
ggcacctaccgccagctcttccaccctgagcaactcatcacaggcaaggaagatgctgcc
aataactatgcccgagggcactacaccattggcaaggagatcattgacctcgtgttggac
cgaattcgcaagctggccgaccagtgcacgggtctccagggcttcttggttttccacagc
tttggtgggggaactggttctgggttcacctccctgctcatggaacgtctctcagttgat
tatggcaagaagtccaagctggagttctccatttacccggcgccccaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaaccttgatattgag
cgtccaacctatactaacctgaataggttaataggtcaaattgtgtcctccatcactgct
tccctgagatttgatggagccctgaatgttgacctgacagaattccagaccaacctggtg
ccctatccccgcatccacttccctctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagcttactgtagcagagatcaccaatgcttgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcttgctgcctgttgtaccgt
ggtgacgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgtacc
atccagtttgtggattggtgccccactggcttcaaggttggcattaattaccagcctccc
actgtggtgcctggcggagacctggccaaggtacagagagctgtgtgcatgctgagcaac
accacagctgttgccgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgaggggatggaggaaggcgagttttcagag
gcccgtgaggacatggctgcccttgagaaggattatgaggaggttggagcagatagtgct
gacggagaggatgagggtgaagagtattaa

KEGG   Pan paniscus (bonobo): 100986068
Entry
100986068         CDS       T02283                                 

Gene name
TUBA8
Definition
(RefSeq) tubulin alpha 8
  KO
K07374  tubulin alpha
Organism
pps  Pan paniscus (bonobo)
Pathway
pps04145  Phagosome
pps04210  Apoptosis
pps04530  Tight junction
pps04540  Gap junction
pps05010  Alzheimer disease
pps05012  Parkinson disease
pps05014  Amyotrophic lateral sclerosis
pps05016  Huntington disease
pps05020  Prion disease
pps05022  Pathways of neurodegeneration - multiple diseases
pps05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100986068 (TUBA8)
  09143 Cell growth and death
   04210 Apoptosis
    100986068 (TUBA8)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100986068 (TUBA8)
   04540 Gap junction
    100986068 (TUBA8)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100986068 (TUBA8)
   05012 Parkinson disease
    100986068 (TUBA8)
   05014 Amyotrophic lateral sclerosis
    100986068 (TUBA8)
   05016 Huntington disease
    100986068 (TUBA8)
   05020 Prion disease
    100986068 (TUBA8)
   05022 Pathways of neurodegeneration - multiple diseases
    100986068 (TUBA8)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100986068 (TUBA8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100986068 (TUBA8)
   03036 Chromosome and associated proteins [BR:pps03036]
    100986068 (TUBA8)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pps04812]
    100986068 (TUBA8)
   04147 Exosome [BR:pps04147]
    100986068 (TUBA8)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100986068 (TUBA8)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100986068 (TUBA8)
Cytoskeleton proteins [BR:pps04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100986068 (TUBA8)
Exosome [BR:pps04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100986068 (TUBA8)
  Exosomal proteins of other body fluids (saliva and urine)
   100986068 (TUBA8)
  Exosomal proteins of colorectal cancer cells
   100986068 (TUBA8)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100986068
NCBI-ProteinID: XP_003828331
UniProt: A0A2R9AU66
LinkDB
Position
22
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK
HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSFEEENEGEEF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgggaatgcatatcagtccacgtgggccaagcgggagttcagattggcaatgcctgc
tgggagctcttctgcctggaacacggcatccaggcagacggcacttttgatgctcaagcc
agcaagatcaacgatgatgactccttcaccacctttttcagcgagactggcaatgggaag
catgtgccccgggccgtcatgatagatctggagcctactgtagtggatgaggttcgggca
ggaacctaccgccagctcttccatccagagcagctgatcacaggaaaggaggatgcagcc
aacaactatgcccggggccactacacggtgggcaaggagagcattgacctggtgctggac
cgcatacggaagctgacagatgcttgctctggcctgcagggcttcctgattttccacagt
tttggtgggggcactggctccggcttcacttctctgctgatggaacgcctctccctggat
tatggcaagaaatccaagctggagtttgccatctacccagccccccaggtctctactgca
gtggtggagccctacaactccatcctgactacccacaccacactggaacattcagattgt
gctttcatggtggacaacgaagccatctatgacatctgccgcaggaatcttgacattgag
cgccctacctataccaacctcaaccgcctcatcagtcagattgtgtcctcaatcactgct
tctctccgctttgacggggccctcaatgtggacctcactgagttccagaccaacctggtg
ccctacccccgcatccacttcccgctggtcacctacgcgcccatcatctctgccgagaaa
gcctatcacgaacagctctctgtggccgagatcaccagctcctgctttgagcccaacagc
cagatggtgaagtgcgacccgagacatggcaagtacatggcctgctgcatgctctaccgg
ggcgacgtggtgcccaaggatgtgaatgtcgctattgctgccatcaagaccaagaggacc
atccagtttgtagactggtgtcccacaggcttcaaggtgggcatcaactaccagccccca
accgtggtccccgggggagacctggccaaggtgcagcgggccgtctgcatgctcagcaac
accacggccatcgcggaggcctgggcccgcctcgaccacaagttcgacctcatgtacgcc
aagcgggcctttgtgcattggtatgtgggagagggaatggaagaaggagaattttctgag
gccagggaagacttagctgccctggagaaggattatgaagaagtggggactgattcgttt
gaagaagaaaatgaaggggaggaattttaa

KEGG   Pan paniscus (bonobo): 100989319
Entry
100989319         CDS       T02283                                 

Gene name
TUBAL3
Definition
(RefSeq) tubulin alpha like 3
  KO
K07374  tubulin alpha
Organism
pps  Pan paniscus (bonobo)
Pathway
pps04145  Phagosome
pps04210  Apoptosis
pps04530  Tight junction
pps04540  Gap junction
pps05010  Alzheimer disease
pps05012  Parkinson disease
pps05014  Amyotrophic lateral sclerosis
pps05016  Huntington disease
pps05020  Prion disease
pps05022  Pathways of neurodegeneration - multiple diseases
pps05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100989319 (TUBAL3)
  09143 Cell growth and death
   04210 Apoptosis
    100989319 (TUBAL3)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100989319 (TUBAL3)
   04540 Gap junction
    100989319 (TUBAL3)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100989319 (TUBAL3)
   05012 Parkinson disease
    100989319 (TUBAL3)
   05014 Amyotrophic lateral sclerosis
    100989319 (TUBAL3)
   05016 Huntington disease
    100989319 (TUBAL3)
   05020 Prion disease
    100989319 (TUBAL3)
   05022 Pathways of neurodegeneration - multiple diseases
    100989319 (TUBAL3)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100989319 (TUBAL3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100989319 (TUBAL3)
   03036 Chromosome and associated proteins [BR:pps03036]
    100989319 (TUBAL3)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pps04812]
    100989319 (TUBAL3)
   04147 Exosome [BR:pps04147]
    100989319 (TUBAL3)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100989319 (TUBAL3)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100989319 (TUBAL3)
Cytoskeleton proteins [BR:pps04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100989319 (TUBAL3)
Exosome [BR:pps04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100989319 (TUBAL3)
  Exosomal proteins of other body fluids (saliva and urine)
   100989319 (TUBAL3)
  Exosomal proteins of colorectal cancer cells
   100989319 (TUBAL3)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100989319
NCBI-ProteinID: XP_003827829
UniProt: A0A2R9B9G3
LinkDB
Position
10
AA seq 446 aa
MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDSQQDQLENAKMEHTNASFDTFF
CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE
VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP
APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLSVECPSHASINRLVVQ
VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT
ACFEFSNQLVKCDPRLGKYMACCLLYRGDVIPKEVNAAIAATKSRHSVQFVDWCPTGFKV
GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM
EEAEFLEAREDLAALERDYEEVVQSF
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagggagtgcctttccatccacatcggtcaagctggcatccagattggggacgcctgc
tgggaactctattgcctggaacatggaatccagccaaacggtgttgttcttgacagtcag
caggatcagctggaaaatgcaaaaatggagcacacaaatgcatctttcgataccttcttc
tgtgagacaagagctgggaagcatgtgcctagagcactcttcgtggacttggagccaact
gttatagatgggatccggacgggccagcaccgttcactcttccaccccgagcagctcctt
agcggaaaggaggatgctgccaacaattacgcgcgaggccgttactctgtggggtcggag
gtcatcgaccttgtgctggagaggacccggaagctggcagaacagtgtggtggacttcag
ggatttttgattttccgaagctttggaggaggcactggttcagggtttacgtctctctta
atggagaggctcacaggagaatatagcagaaagactaagctggagttctcggtctaccca
gcccccaggatctccactgccgtggtagagccttataactctgtcctcaccacccactcc
accacagagcacacggactgtaccttcatggtggacaacgaggccgtctatgatatatgc
catcgtaaactcagtgttgaatgcccctctcatgccagcatcaatagattggtggttcag
gtggtatcttccatcactgcctccctccggtttgaagggcccttgaatgtggacctaatt
gaattccagaccaacctggtaccttatccgagaatacatttccccatgacagccttcgcc
cccatcgtctctgctgacaaagcctaccatgagcagttctctgtgtcagacatcaccact
gcctgctttgagttctccaaccagctggtcaagtgtgatcctcggcttgggaagtacatg
gcctgctgcctactctatagaggggatgtgatccctaaggaagtgaatgcagcaatcgca
gccacgaagtcgaggcactctgttcagtttgtagattggtgtccaactggtttcaaggtg
ggcatcaacaatcggccgcccacggtgatgccgggtggggacctggccaaagtccaccgg
tccatctgcatgctgagcaacaccacggcgattgtggaggcctgggcccgcctggaccac
aagtttgacctcatgtacgccaagagagcatttctgcactggtacctcagagaaggcatg
gaagaagcagagttcttggaggccagggaagatctggcagccctggagagggactatgag
gaagtggtgcaaagtttctga

KEGG   Pan paniscus (bonobo): 100993591
Entry
100993591         CDS       T02283                                 

Gene name
TUBA3C
Definition
(RefSeq) tubulin alpha 3c
  KO
K07374  tubulin alpha
Organism
pps  Pan paniscus (bonobo)
Pathway
pps04145  Phagosome
pps04210  Apoptosis
pps04530  Tight junction
pps04540  Gap junction
pps05010  Alzheimer disease
pps05012  Parkinson disease
pps05014  Amyotrophic lateral sclerosis
pps05016  Huntington disease
pps05020  Prion disease
pps05022  Pathways of neurodegeneration - multiple diseases
pps05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100993591 (TUBA3C)
  09143 Cell growth and death
   04210 Apoptosis
    100993591 (TUBA3C)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100993591 (TUBA3C)
   04540 Gap junction
    100993591 (TUBA3C)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100993591 (TUBA3C)
   05012 Parkinson disease
    100993591 (TUBA3C)
   05014 Amyotrophic lateral sclerosis
    100993591 (TUBA3C)
   05016 Huntington disease
    100993591 (TUBA3C)
   05020 Prion disease
    100993591 (TUBA3C)
   05022 Pathways of neurodegeneration - multiple diseases
    100993591 (TUBA3C)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100993591 (TUBA3C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100993591 (TUBA3C)
   03036 Chromosome and associated proteins [BR:pps03036]
    100993591 (TUBA3C)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pps04812]
    100993591 (TUBA3C)
   04147 Exosome [BR:pps04147]
    100993591 (TUBA3C)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100993591 (TUBA3C)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100993591 (TUBA3C)
Cytoskeleton proteins [BR:pps04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100993591 (TUBA3C)
Exosome [BR:pps04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100993591 (TUBA3C)
  Exosomal proteins of other body fluids (saliva and urine)
   100993591 (TUBA3C)
  Exosomal proteins of colorectal cancer cells
   100993591 (TUBA3C)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100993591
NCBI-ProteinID: XP_003833041
UniProt: A0A2R9A341
LinkDB
Position
13
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctatccacgtggggcaggcaggagtccagatcggcaatgcctgc
tgggaactgtactgcctggaacatggaattcagcccgatggtcagatgccaagtgataaa
accattggtggcggggacgactccttcaacacgttcttcagtgagactggagctggcaag
cacgtgcccagagcagtgtttgtggacctggagcccactgtggtcgatgaagtgcgcaca
ggaacctataggcagctcttccacccagagcagctgatcaccgggaaggaagatgcggcc
aataattacgccagaggccattacaccattggcaaggagatcgtcgacctggtcctggac
cggatccgcaaactggcggatctgtgcacgggactgcagggcttcctcatcttccacagc
tttgggggcggcactggctctgggttcgcatctctgctcatggagcggctctcagtggat
tacggcaagaagtccaagctagaatttgccatttacccagccccccaggtctccacggcc
gtggtggagccctacaactccatcctgaccacccacacgaccctggaacattctgactgt
gccttcatggtcgacaatgaagccatctatgacatatgtcggcgcaacctggacatcgag
cgtcccacgtacaccaacctcaatcgcctgattgggcagatcgtgtcctccatcacggcc
tccctgcgattcgacggggccctgaatgtggacttgacggaattccagaccaacctagtg
ccgtacccccgcatccacttccccctggccacctacgccccggtcatctcagccgagaag
gcctaccacgagcagctgtccgtggctgagatcaccaatgcctgcttcgagccagccaat
cagatggtcaagtgtgaccctcgccacggcaagtacatggcctgctgcatgttgtacagg
ggggatgtggtcccgaaagatgtcaacgcggccatcgccaccatcaagaccaagcgcacc
atccagtttgtagattggtgcccaactggatttaaggtgggcattaactaccagcccccc
acggtggtccctgggggagacctggccaaggtgcagcgggctgtgtgcatgctgagcaac
accacggccatcgcggaggcctgggctcgcctggaccataagttcgatctcatgtatgcc
aagcgggcctttgtgcactggtacgtgggagaaggcatggaggagggggagttctctgag
gcccgcgaggacctggcagctctggagaaggattatgaagaggtgggcgtggattccgtg
gaagccgaggctgaagaaggtgaagaatactga

KEGG   Pan paniscus (bonobo): 100995882
Entry
100995882         CDS       T02283                                 

Gene name
TUBA4A
Definition
(RefSeq) tubulin alpha 4a
  KO
K07374  tubulin alpha
Organism
pps  Pan paniscus (bonobo)
Pathway
pps04145  Phagosome
pps04210  Apoptosis
pps04530  Tight junction
pps04540  Gap junction
pps05010  Alzheimer disease
pps05012  Parkinson disease
pps05014  Amyotrophic lateral sclerosis
pps05016  Huntington disease
pps05020  Prion disease
pps05022  Pathways of neurodegeneration - multiple diseases
pps05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100995882 (TUBA4A)
  09143 Cell growth and death
   04210 Apoptosis
    100995882 (TUBA4A)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100995882 (TUBA4A)
   04540 Gap junction
    100995882 (TUBA4A)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100995882 (TUBA4A)
   05012 Parkinson disease
    100995882 (TUBA4A)
   05014 Amyotrophic lateral sclerosis
    100995882 (TUBA4A)
   05016 Huntington disease
    100995882 (TUBA4A)
   05020 Prion disease
    100995882 (TUBA4A)
   05022 Pathways of neurodegeneration - multiple diseases
    100995882 (TUBA4A)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100995882 (TUBA4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100995882 (TUBA4A)
   03036 Chromosome and associated proteins [BR:pps03036]
    100995882 (TUBA4A)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pps04812]
    100995882 (TUBA4A)
   04147 Exosome [BR:pps04147]
    100995882 (TUBA4A)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100995882 (TUBA4A)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100995882 (TUBA4A)
Cytoskeleton proteins [BR:pps04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100995882 (TUBA4A)
Exosome [BR:pps04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100995882 (TUBA4A)
  Exosomal proteins of other body fluids (saliva and urine)
   100995882 (TUBA4A)
  Exosomal proteins of colorectal cancer cells
   100995882 (TUBA4A)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100995882
NCBI-ProteinID: XP_003818696
UniProt: A0A2R8ZC21
LinkDB
Position
2B
AA seq 448 aa
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSYEDEDEGEE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcatctcagtccacgtggggcaggcaggtgtccagatgggcaatgcctgc
tgggagctctattgcttggaacatgggattcagcctgatgggcagatgcccagtgacaag
accattggtggaggggacgactccttcaccaccttcttctgtgaaactggtgctggaaaa
cacgtaccccgggcagtttttgtggatctggagcctacggtcattgatgagatccgaaat
ggcccataccgacagctcttccacccagagcagctcatcactgggaaagaggatgctgcc
aacaactatgcccgtggtcactataccattggcaaggagatcattgacccagtgctggat
cggatccgcaagctgtctgaccagtgcacaggacttcagggcttcctggtgttccacagc
tttggtgggggcactggctctggcttcacctcactcctgatggagcggctctctgttgac
tatggcaagaaatccaagctggaattctccatctacccagccccccaggtgtctacagcc
gtggtcgagccctacaactctatcctgaccacccacaccaccctggagcactcagactgt
gccttcatggtggacaacgaagcaatctatgacatctgccgccgcaacctagacatcgag
cgcccaacctacaccaacctcaatcgcctcattagccaaattgtctcctccatcacagct
tctctgcgctttgacggggccctcaatgtggacctgacagagttccagaccaacctggtg
ccctaccctcgcatccacttccccctggccacctatgcaccagtcatctctgcagaaaag
gcataccacgagcagctgtcggtggcagagatcaccaatgcctgctttgagcctgccaac
cagatggtaaagtgtgatccccggcacggcaagtacatggcctgctgcctgctgtaccgt
ggagatgtggtgcccaaggatgtcaacgctgccattgccgccatcaagaccaagcgcagc
attcagtttgtggactggtgccccacaggcttcaaggttggtatcaactaccagcctccc
actgtggtgcctgggggtgacctggccaaggtgcagcgtgctgtgtgcatgctgagcaac
acgaccgccatcgccgaggcctgggcccgcctggaccacaagttcgacctgatgtatgcc
aagagggcgtttgtgcactggtatgtgggtgagggcatggaggagggtgagttctccgag
gcccgtgaggatatggctgccctggagaaggattacgaggaggtgggcatcgactcctat
gaggatgaggatgagggagaagaataa

KEGG   Pan paniscus (bonobo): 103782837
Entry
103782837         CDS       T02283                                 

Gene name
TUBA1B
Definition
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
pps  Pan paniscus (bonobo)
Pathway
pps04145  Phagosome
pps04210  Apoptosis
pps04530  Tight junction
pps04540  Gap junction
pps05010  Alzheimer disease
pps05012  Parkinson disease
pps05014  Amyotrophic lateral sclerosis
pps05016  Huntington disease
pps05020  Prion disease
pps05022  Pathways of neurodegeneration - multiple diseases
pps05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103782837 (TUBA1B)
  09143 Cell growth and death
   04210 Apoptosis
    103782837 (TUBA1B)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    103782837 (TUBA1B)
   04540 Gap junction
    103782837 (TUBA1B)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    103782837 (TUBA1B)
   05012 Parkinson disease
    103782837 (TUBA1B)
   05014 Amyotrophic lateral sclerosis
    103782837 (TUBA1B)
   05016 Huntington disease
    103782837 (TUBA1B)
   05020 Prion disease
    103782837 (TUBA1B)
   05022 Pathways of neurodegeneration - multiple diseases
    103782837 (TUBA1B)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103782837 (TUBA1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    103782837 (TUBA1B)
   03036 Chromosome and associated proteins [BR:pps03036]
    103782837 (TUBA1B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pps04812]
    103782837 (TUBA1B)
   04147 Exosome [BR:pps04147]
    103782837 (TUBA1B)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103782837 (TUBA1B)
Chromosome and associated proteins [BR:pps03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     103782837 (TUBA1B)
Cytoskeleton proteins [BR:pps04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    103782837 (TUBA1B)
Exosome [BR:pps04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103782837 (TUBA1B)
  Exosomal proteins of other body fluids (saliva and urine)
   103782837 (TUBA1B)
  Exosomal proteins of colorectal cancer cells
   103782837 (TUBA1B)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 103782837
NCBI-ProteinID: XP_008949408
UniProt: A0A2R9CC67
LinkDB
Position
12
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgttggccaggctggtgtccagattggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcccgatggccagatgccaagtgacaag
actattgggggaggagatgactccttcaacaccttcttcagtgagacgggcgctggcaag
cacgtgccccgggctgtgtttgtagacttggaacccacagtcattgatgaagttcgcact
ggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgagggcactacaccattggcaaggagatcattgaccttgtgttggac
cgaattcgcaagctggctgaccagtgcaccggtcttcagggcttcttggttttccacagc
tttggtgggggaactggttctgggttcacctccctgctcatggaacgtctctcagttgat
tatggcaagaagtccaagctggagttctccatttacccggcgccccaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatatcgag
cgcccaacctacactaaccttaaccgccttattagccagattgtgtcctccatcactgct
tccctgagatttgatggagccctgaatgttgacctgacagaattccagaccaacctggtg
ccctacccccgcatccacttccctctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcttgctgcctgttgtaccgt
ggtgacgtggttcccaaagatgtcaatgctgccattgccaccatcaaaaccaagcgcagc
atccagtttgtggattggtgccccactggcttcaaggttggcatcaactaccagcctccc
actgtggtgcctggtggagacctggccaaggtacagagagctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgaggggatggaggaaggtgagttttcagag
gcccgtgaagatatggctgcccttgagaaggattatgaggaggttggtgtggattctgtt
gaaggagagggtgaggaagaaggagaggaatactaa

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