Pan paniscus (bonobo): 100980341
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Entry
100980341 CDS
T02283
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X3
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pps
Pan paniscus (bonobo)
Pathway
pps00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100980341 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pps01007
]
100980341 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pps03016
]
100980341 (VARS2)
Enzymes [BR:
pps01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100980341 (VARS2)
Amino acid related enzymes [BR:
pps01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100980341 (VARS2)
Transfer RNA biogenesis [BR:
pps03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100980341 (VARS2)
Prokaryotic type
100980341 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
FmiP_Thoc5
tRNA-synt_1b
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
100980341
NCBI-ProteinID:
XP_008957696
Ensembl:
ENSPPAG00000041141
LinkDB
All DBs
Position
6:30659346..30671678
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AA seq
1063 aa
AA seq
DB search
MPHLPLASFRPPFWGLRHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEA
EIAGESKSPAESIKAWRPKELVLYEIPTKPGEKKDVSGPLPPAYSPRYVEAAWYPWWVRE
GFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWV
PGSDHAGIATQAVVEKQLWKERGVRRHELSREAFLREVWQWKEAKGGEICEQLRALGASL
DWDRECFTMDVGSSVAVTEAFVQLYKAGLLYRNHQLVNWSCALRSAISDIEVENRPLPGH
TQLRLPGCPTPVSFGLLFSIAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHL
HGRQLRHPLMGQPLPLITDYAVQPHVGTGAVKVTPAHSPADAEMGARHGLSPLNVIAEDG
TMTSLCGDWLQGLHRFVAREKIMSVLSERGLFRGLQNHPMVLPICSRSGDVIEYLLKNQW
FVRCQEMGARAAKAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHQIPAYLVVE
DHAQGEEDCWVVGRSEAEAREVAAELTGRPGAELTLERDPDVLDTWFSSALFPFSALGWP
QETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHPMVRDRQGRKMS
KSLGNVLDPRDIISGVEMQVLQEKLRSGNLDPAELAIVAAAQKKDFPHGIPECGTDALRF
TLCSHGVQVGDLHLSVSEVQSCRHFCNKIWNALRFILNALGEKFVPQPAEELSPSSPMDA
WILSRLALAAQECERGFLTRELSLVTHALHHFWLHNLCDVYLEAVKPVLWHSPRPLGPPQ
VLFSCADLGLRLLAPLMPFLAEELWQRLPPRAGCPPAPSISVAPYPSACSLEHWRQPELE
RRFSRVQEVVQVLRALRATYQLTKARPRVLLQSSEPGDQGLFEAFLEPLGTLGYCGAVDL
LPPGAAAPSGWAQAPLSDTAQVYMELQGLVDPQIQLPLLAARRYKLQKQLDSLTARTPSE
GEAGTQRQQKLSSLQLELSKLDKAASHLRQLMDEPPAPGSPEL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcctctcgcctcttttcgaccaccgttttgggggctgaggcactcacgg
ggcctccccaggtttcactccgtttctacacagtcggagccccatggatctcccatctcc
cggaggaaccgtgaagccaaacagaagcgcctgcgagagaagcaggcgactctggaggct
gagatagcaggggagagcaagtcacctgcagaatccattaaggcctggaggcctaaggag
ttagtattgtatgaaatccctacgaaacccggtgaaaagaaagatgtctctgggcccctg
cctcctgcatacagcccccgatatgttgaggctgcctggtacccgtggtgggtacgagag
ggcttcttcaaaccagaatatcaggcccggctgccccaagctacaggggagaccttttcc
atgtgtatcccacctcccaatgtcactggctccctgcacattggccacgcactcacggtg
gccatacaggatgccctcgtgcgctggcaccggatgcgtggggatcaagtgctgtgggtc
cctggttcagatcatgcaggaattgctacacaagctgtggtggagaaacaactgtggaag
gaacggggagtgaggagacatgagctgagccgggaggccttccttagggaggtgtggcag
tggaaggaggcgaaaggtggagagatctgtgagcagctgcgagctctgggtgcctccctg
gactgggatcgagagtgttttaccatggatgttggctcctcagtggctgtgactgaagct
tttgtgcagctctacaaggcggggttgctgtaccggaaccatcagcttgtcaactggtca
tgtgctttaagatcagccatctcagacattgaggtggagaaccggcccctgcctggccac
acacagcttcgactgcctggctgccccacccccgtgtcttttggcctcctattttctatt
gccttcccggtggatggagagcctgatgcagaggttgtggtaggaaccacaaggccagag
acgctgcctggagatgtggctgtggccgttcatccagacgactcgcgatacacacatcta
cacgggcgacagcttcgtcaccccttgatggggcagcctcttcccctcatcacagactat
gctgttcagccacatgtgggcacgggggcagtgaaggtgactccagctcacagtcctgcc
gatgctgagatgggggcccgacatggcttgagccccttgaatgtcattgcggaggatggg
accatgacctccctctgcggggactggctgcagggtcttcaccggtttgtggcccgggaa
aagataatgtctgtgctgagtgaacggggcctgttccggggcctccagaaccaccccatg
gtactgcccatctgcagccgttctggggatgtgatagaatacctgctgaagaaccagtgg
tttgtccgctgccaggaaatgggggcccgagctgccaaggctgtggagtcgggggccctg
gagctcagtccctccttccaccagaagaattggcagcactggttttcccatattggggac
tggtgtgtctcccggcagctgtggtggggccatcagattccagcctacctggttgtagag
gaccatgcgcagggagaagaggactgttgggtggttgggcggtcagaggctgaggccaga
gaggtagcagcggaactgacagggaggccaggggcagagctgaccctggagagggatcct
gatgtcctagacacatggttttcttctgccctgttccccttttctgccctgggctggccc
caagagaccccagaccttgctcgtttctaccccctgtcacttttggaaacgggcagtgac
cttctgctgttctgggtgggccgcatggtcatgttggggacccagctcacagggcagctg
cccttcagcaaggtgcttcttcatcccatggttcgggacaggcagggccggaagatgagc
aagtccctggggaatgtgctggacccaagagacatcatcagtggggtggagatgcaggtg
ctgcaggaaaagctgagaagcggaaatttggaccctgcagagctggccattgtggctgca
gcacagaaaaaggactttcctcacgggatccctgagtgtgggacagatgccctgagattc
acactctgctcccatggagttcaggtgggcgacttgcacctgtcagtctctgaggtccag
agctgccgacatttctgcaacaagatctggaatgctcttcgctttatcctcaatgcttta
ggggagaaatttgtgccacagcctgctgaggagctgtctccctcctccccgatggatgcc
tggatcttgagccgccttgccctggctgcccaggagtgtgagcggggcttcctcacccga
gagctctcgctcgtcactcatgccctgcaccacttctggcttcacaacctctgtgacgtc
tacctggaggctgtgaagcccgtgctgtggcactcgccccgccccctggggccccctcag
gtcctgttctcctgcgctgacctcggcctccgcctcctggccccactgatgcccttcctg
gctgaagagctctggcagaggctgccccccagggctggttgcccccctgcccccagcatc
tcggttgccccctaccccagcgcctgcagcttggagcactggcgccagccagagctggag
cggcgcttctcccgggtccaagaggtcgtgcaggtgctaagggctctccgagccacgtac
cagctcaccaaagcccggccccgagtgctgctgcagagctcagagcctggggaccagggc
ctcttcgaggccttcttggagcccctgggcaccctgggctactgtggggctgtggacctg
ttacccccaggcgcagcagctccctccggctgggcccaggctccactcagtgacacggct
caagtctacatggagctgcagggcctggtggacccgcagatccagctacctctgttagcc
gcccgaaggtacaagttgcagaagcagcttgatagcctcacagccaggaccccatcagaa
ggggaggcagggactcagaggcaacaaaagctttcttccctccagctggaattgtcaaaa
ctggacaaggcagcctctcacctccggcagctgatggatgagcctccagccccagggagc
ccggagctctaa
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