Paenibacillus psychroresistens: EHS13_00930
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Entry
EHS13_00930 CDS
T06328
Gene name
pcrA
Definition
(GenBank) DNA helicase PcrA
KO
K03657
DNA helicase II / ATP-dependent DNA helicase PcrA [EC:
3.6.4.12
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03420
Nucleotide excision repair
ppsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHS13_00930 (pcrA)
03430 Mismatch repair
EHS13_00930 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_00930 (pcrA)
Enzymes [BR:
ppsc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.12 DNA helicase
EHS13_00930 (pcrA)
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHS13_00930 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
EHS13_00930 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Exonuc_V_gamma
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QGQ93583
UniProt:
A0A6B8RDF6
LinkDB
All DBs
Position
199682..201988
Genome map
AA seq
768 aa
AA seq
DB search
MMNAQIDIYESISKLNPEQKKAVEAVSGPLLIMAGAGSGKTRVLTHRIAYLVASGKAAPW
SILAITFTNKAAREMQDRVGQLVGNSARDIWVSTFHSMCVRILRRDISRIGFTNNFTILD
STDQLSVIRACMKELNIDTKKFEPKAIQAAMGGAKNELISPEQFANKIGDYMQDITAKVY
KLYQKKLKSNNSLDFDDLIMMTIQLFNEEPEVLQHYQNKFLYIHVDEYQDTNRAQYMLCK
MIAERHHRICVVGDGDQSIYGWRGADITNILNFEQDYPEATTILLEQNYRSTSNILNAAN
KVIANNTGRKPKNLWTSKDEGAKIQLYQADTEHEEGYFITSEIKKSIANGKKYLDHAILY
RANAQSRVIEEILIKSEIPYKIFGGIKFYDRKEIKDILGYLRLISNPNDDISLVRIINVP
KRAIGDTTVDKLIALSLQKDQSIFETLLDHLDELEVSPRTKKALSDFCDLISNLYRMVEY
ISVTELAEQLLEQTQYRAELIREGSLESKSRLENIEEFLSVTQEFEKRNEDEDRSLLAFL
TDLALIADIDLMGKDPEVAVDNNSVVLMTMHSAKGLEFPVVFIAGMEEGIFPHSRTLADP
EEMEEERRLAYVGITRAEEQLFLTCSRMRTLFGKTNSNMPSRFLKEIPDEVKESPSRGKE
SYGGGGAGASYRLGQARTFGQNATGSTFGQSSTSINTNRPVTSTPMVAATVNGVTDFRNG
DKVVHNKWGTGTIVAVKGTGEDMELNIAFPAPVGVKRLLAKFAPITKA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgcgcaaattgatatatacgagtcgatatccaaattaaatccggaacagaaa
aaagcggtagaggcggtaagtgggccgctattaatcatggctggagcaggcagtggcaag
acacgggtactgacccaccggattgcttatttagttgcttctggcaaggcggcgccttgg
agtattctcgccattacctttactaataaagcagcacgtgaaatgcaggatcgggttgga
cagctagttgggaattcagcaagagatatctgggtttccaccttccactccatgtgtgtg
cgtattctgcgccgagatatttcgcgtattggatttacgaataatttcacgatactggat
tccacggatcagctttcggttattcgcgcttgcatgaaagaattgaacatcgacacgaag
aagtttgaacccaaagccatccaagccgccatgggcggagccaagaatgagctaatctca
cccgagcagtttgccaataaaatcggtgattatatgcaggacattaccgccaaagtatac
aaactctatcaaaaaaagcttaaaagcaacaattcgctagatttcgatgatttaattatg
atgacgattcaattgtttaacgaggaacccgaagtgctccagcactatcagaataagttt
ctttacatccacgtggatgagtatcaggatacgaatcgggcccaatatatgctgtgcaaa
atgatcgcagagcgccatcatcgtatttgtgtggtaggtgacggagatcagtcgatttac
ggctggcgtggagcggatatcacgaatatcttgaattttgagcaggattatccggaagcc
acaacgatactattagagcaaaactaccgatctacctcgaatatattgaatgcagcgaac
aaagtcatagctaacaatacaggccgtaaaccgaagaatctctggaccagcaaggacgaa
ggcgccaaaatccagctctaccaagcagataccgagcatgaagaagggtactttattacc
tcagagattaagaagagcatagccaatggtaaaaaatatctggatcacgctatcctatat
cgcgccaatgcacagtctcgggttatagaggaaattctgatcaagtcggagattccttat
aagatttttggcggcattaagttctacgaccgtaaagaaatcaaggacattctcggctat
ttacgtttaatttccaatccgaatgatgatattagtttagtgcggattattaatgtgccg
aagcgggcgattggcgatacaaccgtggataagcttatcgcattgtcgcttcagaaggac
caatctatttttgaaacgctgttggatcatttggatgagcttgaggttagtccacgtacg
aagaaggctttaagtgatttttgtgatttaatcagcaatttatatcgtatggtggagtat
ataagcgtaacagagctagccgagcagctgctggagcaaactcagtatcgtgctgaatta
atccgcgaaggctcgttagaatccaaatcgcgcttagagaatatagaagaatttctctcg
gttacccaagaatttgagaaacgaaatgaagatgaagaccgctccttgctggctttttta
acagatctagctttaattgcagacattgatttgatgggcaaggatcccgaggtagccgtt
gacaacaattcagttgtattaatgacaatgcatagcgctaagggattggagtttccggtt
gtattcattgcagggatggaagaaggcatatttcctcacagccgaacactggcagaccct
gaagaaatggaagaggaacgtcggctagcttatgttggcatcactcgagcagaggaacaa
ttgtttctaacttgctcacggatgcgaactttgtttggtaaaaccaacagcaatatgcct
tctcgctttttgaaggaaatccctgatgaagtgaaagagtcgccttcacggggtaaagaa
agctatggcggaggaggagcgggcgcttcttatcgattgggacaagcgcgtacttttggg
caaaatgcaacgggaagcactttcggacagtcgtcgacaagtattaatacgaataggccg
gtaacttcaactccgatggtagctgcgactgtaaatggagtgaccgatttcaggaatggc
gacaaagttgttcataacaagtgggggacaggcactattgtagctgttaaaggcacgggt
gaggatatggagctcaatattgcttttccggcacctgtaggagtaaaaaggctgttggcc
aaatttgcacccataaccaaggcttga
DBGET
integrated database retrieval system
