Paenibacillus psychroresistens: EHS13_03950
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Entry
EHS13_03950 CDS
T06328
Definition
(GenBank) DNA helicase UvrD
KO
K03657
DNA helicase II / ATP-dependent DNA helicase PcrA [EC:
3.6.4.12
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03420
Nucleotide excision repair
ppsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHS13_03950
03430 Mismatch repair
EHS13_03950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_03950
Enzymes [BR:
ppsc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.12 DNA helicase
EHS13_03950
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHS13_03950
MMR (mismatch excision repair)
Other MMR factors
EHS13_03950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
AAA_19
UvrD-helicase
UvrD_C_2
Viral_helicase1
DUF2075
PhoH
AAA_30
NACHT
T2SSE
AAA_16
ResIII
DEAD
DUF1726
Motif
Other DBs
NCBI-ProteinID:
QGQ94118
UniProt:
A0A6B8RFB8
LinkDB
All DBs
Position
832033..834186
Genome map
AA seq
717 aa
AA seq
DB search
MLDQTQSAYQDELKQLKKTTDEIDKQLQKIVETPRYFGQDLTEQVLDLNREVKREHLQKA
SAEPYFGRLDYQEIGKTQPFPLYIGKNGVENDKTHELLVIDWRAPVASLFYSFTGGTEEA
TYESPEDGTISGHVLLKRNLVIRQQVLQRVVDTYDRDSDEPTITDEFLLYRLGENKDNRL
RDIVSTIQAEQDQIIRSVRNTAIVIQGVAGSGKTTVALHRLAFLLYQYRDNIRAERMIIF
APNSMFLDYISGVLPELGVGHIQQTIFQDWTLALLDNAVKLTDSTKRLAYWFNIGAKKPQ
IDNQAPGRFKGSIAFLHYIDEKLQQFEAACLPTADLVAWEGKTLLNKTVHEWFYVENKHY
PLMKRRDRTVARMKRWIEIELTKFPSESMRKEYKKKANDRLRAYLKQWPEESPFSFYKTI
FTEPHVPDELIKESNLLFKKKEVQPEDLAPLIYIHNRFYGIESEQMFDHVVIDEAQDFSP
FQVALLKEQTRGGSFTILGDLSQGIHAYQGIWNWDEISSLFEADRTMYHQLDRSYRSTME
IIHFANAVLSRGGEAITPAIPVFRSGEKVRLIELGNEQQKVEALLKAVGKLQESGLINTI
AIVDRTERECAILHEALTGKGLAANLIEAGQREYLGGISVLPVYLTKGLEFDAVLIIDAD
PLHYEQNFQDAKLLYVGCTRALHELWLFYVGEASPLFANLLYNEEINNGFAIEERWL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atcttggaccagactcaaagtgcctatcaagacgagcttaaacagctcaagaaaacaacc
gatgaaatcgacaagcagctgcagaagattgtggaaacgccacgctacttcgggcaggat
ttaacggaacaggttttggatttaaatcgtgaggtcaagcgggagcatctgcaaaaagct
agtgcggagccatattttggacgtttggattatcaggaaattggtaaaacccaaccattt
ccgctttatatcggcaagaatggtgtcgagaatgacaaaacccatgaactattagttata
gattggcgtgcacctgtcgccagtcttttttactcttttacaggcggtacagaggaagcg
acttatgaatcaccagaggatggcaccatcagcgggcacgttctgttaaagcgaaattta
gtgattcgccagcaggtgctgcagcgtgtagtggatacctacgatcgagatagcgatgag
ccgacgataacggatgaattcttactctaccgactaggtgagaataaagataatcgcttg
cgagatatcgtttcaaccattcaagccgaacaggatcagattattcgctcggtaagaaat
acggctatcgtgattcaaggggttgctgggagtggaaaaacaacggtagctttgcatcgt
ctggctttcttgctctaccaatatcgcgataatatccgcgcggagcggatgattattttt
gccccgaatagcatgtttctcgattacatctcaggtgttctgccagagcttggtgtaggt
catattcaacaaacgatttttcaggattggactttggcattattagataatgcagtgaag
ctgactgattcgactaaacgcttagcttattggtttaatattggagcaaaaaaaccgcaa
attgataatcaagctccgggtcgttttaaaggctcgattgctttccttcattatatagat
gaaaaattacaacagtttgaagccgcttgcctacctacagcagatctagttgcttgggaa
gggaaaaccttgctcaataagacggttcatgaatggttttatgtcgagaacaagcattat
ccactaatgaaacgtcgtgatcgtactgtggcgcggatgaagcgctggatagaaattgag
ttaactaaatttcctagtgagtcgatgcgcaaagaatacaagaagaaagccaatgaccgc
ttgcgtgcctacttgaagcaatggccagaggaatccccgttttctttttacaaaactatt
ttcacagaacctcatgtaccagatgagttaattaaagaatctaacctgcttttcaagaaa
aaagaggttcaaccagaggatttagcaccgctcatttatatccacaatcggttttatgga
attgaaagcgagcaaatgtttgatcatgtagtgatagatgaagcccaggatttctcgccg
tttcaggtagctttacttaaggagcagacccgcggaggttcttttacgatactaggtgat
ttgtcgcaagggattcatgcttaccaggggatctggaattgggatgagatttcctcacta
tttgaggcagaccgcacgatgtatcatcaattggaccgcagctatcgttcgaccatggaa
attattcattttgccaatgccgtattgagtcgtggtggtgaagctattacaccagctatc
cctgtgttccgcagtggggaaaaggtacgtttgatcgaattgggcaatgagcagcaaaag
gtggaggctttattgaaggcagtaggcaagctgcaggaaagtggcttgattaatacgatt
gcaattgttgatcggacggaacgagaatgtgcaattctgcatgaggctttaacaggaaaa
ggcttggcagccaacttaattgaagcgggacaacgggaatatctcggtggaatctcggtg
cttccagtctatttaaccaaaggcttggaatttgatgctgtattgattattgatgcggat
ccgctccattatgaacagaatttccaggatgcgaagctgctttatgtcggttgtacgcgg
gcattgcacgagctgtggttattttatgtaggagaagcttcccctttattcgccaatcta
ttatataatgaagaaattaataatgggtttgctatagaggagagatggctttga
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