KEGG   Paenibacillus psychroresistens: EHS13_03950
Entry
EHS13_03950       CDS       T06328                                 
Name
(GenBank) DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ppsc  Paenibacillus psychroresistens
Pathway
ppsc03420  Nucleotide excision repair
ppsc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EHS13_03950
   03430 Mismatch repair
    EHS13_03950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppsc03400]
    EHS13_03950
Enzymes [BR:ppsc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EHS13_03950
DNA repair and recombination proteins [BR:ppsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EHS13_03950
   MMR (mismatch excision repair)
    Other MMR factors
     EHS13_03950
SSDB
Motif
Pfam: UvrD_C UvrD-helicase UvrD_C_2 AAA_19 Viral_helicase1 SLFN-g3_helicase PhoH AAA_30 DEAD NACHT ResIII AAA_16 nSTAND3 DUF6468
Other DBs
NCBI-ProteinID: QGQ94118
UniProt: A0A6B8RFB8
LinkDB
Position
832033..834186
AA seq 717 aa
MLDQTQSAYQDELKQLKKTTDEIDKQLQKIVETPRYFGQDLTEQVLDLNREVKREHLQKA
SAEPYFGRLDYQEIGKTQPFPLYIGKNGVENDKTHELLVIDWRAPVASLFYSFTGGTEEA
TYESPEDGTISGHVLLKRNLVIRQQVLQRVVDTYDRDSDEPTITDEFLLYRLGENKDNRL
RDIVSTIQAEQDQIIRSVRNTAIVIQGVAGSGKTTVALHRLAFLLYQYRDNIRAERMIIF
APNSMFLDYISGVLPELGVGHIQQTIFQDWTLALLDNAVKLTDSTKRLAYWFNIGAKKPQ
IDNQAPGRFKGSIAFLHYIDEKLQQFEAACLPTADLVAWEGKTLLNKTVHEWFYVENKHY
PLMKRRDRTVARMKRWIEIELTKFPSESMRKEYKKKANDRLRAYLKQWPEESPFSFYKTI
FTEPHVPDELIKESNLLFKKKEVQPEDLAPLIYIHNRFYGIESEQMFDHVVIDEAQDFSP
FQVALLKEQTRGGSFTILGDLSQGIHAYQGIWNWDEISSLFEADRTMYHQLDRSYRSTME
IIHFANAVLSRGGEAITPAIPVFRSGEKVRLIELGNEQQKVEALLKAVGKLQESGLINTI
AIVDRTERECAILHEALTGKGLAANLIEAGQREYLGGISVLPVYLTKGLEFDAVLIIDAD
PLHYEQNFQDAKLLYVGCTRALHELWLFYVGEASPLFANLLYNEEINNGFAIEERWL
NT seq 2154 nt   +upstreamnt  +downstreamnt
atcttggaccagactcaaagtgcctatcaagacgagcttaaacagctcaagaaaacaacc
gatgaaatcgacaagcagctgcagaagattgtggaaacgccacgctacttcgggcaggat
ttaacggaacaggttttggatttaaatcgtgaggtcaagcgggagcatctgcaaaaagct
agtgcggagccatattttggacgtttggattatcaggaaattggtaaaacccaaccattt
ccgctttatatcggcaagaatggtgtcgagaatgacaaaacccatgaactattagttata
gattggcgtgcacctgtcgccagtcttttttactcttttacaggcggtacagaggaagcg
acttatgaatcaccagaggatggcaccatcagcgggcacgttctgttaaagcgaaattta
gtgattcgccagcaggtgctgcagcgtgtagtggatacctacgatcgagatagcgatgag
ccgacgataacggatgaattcttactctaccgactaggtgagaataaagataatcgcttg
cgagatatcgtttcaaccattcaagccgaacaggatcagattattcgctcggtaagaaat
acggctatcgtgattcaaggggttgctgggagtggaaaaacaacggtagctttgcatcgt
ctggctttcttgctctaccaatatcgcgataatatccgcgcggagcggatgattattttt
gccccgaatagcatgtttctcgattacatctcaggtgttctgccagagcttggtgtaggt
catattcaacaaacgatttttcaggattggactttggcattattagataatgcagtgaag
ctgactgattcgactaaacgcttagcttattggtttaatattggagcaaaaaaaccgcaa
attgataatcaagctccgggtcgttttaaaggctcgattgctttccttcattatatagat
gaaaaattacaacagtttgaagccgcttgcctacctacagcagatctagttgcttgggaa
gggaaaaccttgctcaataagacggttcatgaatggttttatgtcgagaacaagcattat
ccactaatgaaacgtcgtgatcgtactgtggcgcggatgaagcgctggatagaaattgag
ttaactaaatttcctagtgagtcgatgcgcaaagaatacaagaagaaagccaatgaccgc
ttgcgtgcctacttgaagcaatggccagaggaatccccgttttctttttacaaaactatt
ttcacagaacctcatgtaccagatgagttaattaaagaatctaacctgcttttcaagaaa
aaagaggttcaaccagaggatttagcaccgctcatttatatccacaatcggttttatgga
attgaaagcgagcaaatgtttgatcatgtagtgatagatgaagcccaggatttctcgccg
tttcaggtagctttacttaaggagcagacccgcggaggttcttttacgatactaggtgat
ttgtcgcaagggattcatgcttaccaggggatctggaattgggatgagatttcctcacta
tttgaggcagaccgcacgatgtatcatcaattggaccgcagctatcgttcgaccatggaa
attattcattttgccaatgccgtattgagtcgtggtggtgaagctattacaccagctatc
cctgtgttccgcagtggggaaaaggtacgtttgatcgaattgggcaatgagcagcaaaag
gtggaggctttattgaaggcagtaggcaagctgcaggaaagtggcttgattaatacgatt
gcaattgttgatcggacggaacgagaatgtgcaattctgcatgaggctttaacaggaaaa
ggcttggcagccaacttaattgaagcgggacaacgggaatatctcggtggaatctcggtg
cttccagtctatttaaccaaaggcttggaatttgatgctgtattgattattgatgcggat
ccgctccattatgaacagaatttccaggatgcgaagctgctttatgtcggttgtacgcgg
gcattgcacgagctgtggttattttatgtaggagaagcttcccctttattcgccaatcta
ttatataatgaagaaattaataatgggtttgctatagaggagagatggctttga

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