Paenibacillus psychroresistens: EHS13_07975
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Entry
EHS13_07975 CDS
T06328
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EHS13_07975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_07975
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EHS13_07975
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Motif
Pfam:
Ku
Phage_ssDNA_bind
SLX1_C
Motif
Other DBs
NCBI-ProteinID:
QGR00002
UniProt:
A0A6B8RUB1
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Position
1767977..1768813
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AA seq
278 aa
AA seq
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MQTIWKGAINFGLVNVPVKMYTATEDNDISMKMLHKDYNVPIHYAKTCVKCKEEVEWSDV
VKGYEYEPGHYVTFDNKEMDALASSASREIQILDFVDLEEIDPIYYQKTYYLAPEKSGMH
AYSLLLEALVATNKIGVANVTIRSKSSLAAIRAVDGVLSMVTMHYAEEIRARELIPNLPK
KAKINERELDMAKMLIEQLSAKFEPDKYKDEYRERMLAAIEDKVEGKDVKLAPEEKKNNV
IDLMDALKASLKQSKIEPAKKTAEAKKMAKTHKKKAGA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgatttggaagggtgcgatcaacttcggtttggttaatgttcctgtcaaaatg
tatacggctacggaagataacgatatttcgatgaaaatgctgcacaaagactataatgtt
cccatccactacgccaaaacctgcgtaaaatgcaaggaagaggtagaatggagcgacgtt
gttaagggttatgaatatgagccaggtcattatgtgacatttgataacaaggaaatggat
gcattggcatcttcagcttctcgcgaaattcaaattttggattttgtcgatctggaggaa
attgatccgatttactatcagaaaacttattatctagcacctgagaaatcgggaatgcat
gcgtactcacttctattagaagcgttggttgccactaataaaattggggttgcgaatgtt
acgattcgctccaaaagcagtttagccgccattcgcgcagtagatggtgttctctccatg
gtaacgatgcattatgcagaagaaattcgtgctagagagcttattcccaatcttccgaag
aaagctaaaatcaacgaacgagaattggacatggccaaaatgttgattgagcagcttagt
gccaaatttgagcccgataaatataaagatgaatatagagaaaggatgctggctgctatt
gaagataaggtagaaggcaaggatgttaagctggcaccagaagagaagaaaaacaatgta
attgacttaatggatgctttaaaggctagcttgaagcaatctaaaattgagccagcaaag
aaaacggctgaagctaaaaagatggctaaaacgcataagaagaaggcaggagcataa
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