Paenibacillus psychroresistens: EHS13_17990
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Entry
EHS13_17990 CDS
T06328
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03420
Nucleotide excision repair
ppsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHS13_17990
03430 Mismatch repair
EHS13_17990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_17990
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHS13_17990
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHS13_17990
MMR (mismatch excision repair)
Other MMR factors
EHS13_17990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_16
AAA_22
SLFN-g3_helicase
DEAD
AAA_30
NACHT
Motif
Other DBs
NCBI-ProteinID:
QGQ96631
UniProt:
A0A6B8RJK9
LinkDB
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Position
complement(3980356..3982737)
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AA seq
793 aa
AA seq
DB search
MSLTESDWQFEQQRMEHVNDQLNQRMEQLAQEVGLVKGDIGDIRKNFWDGITINLGNPDD
MGETFFSIKQQADVISERERMHKLAVVTLDKLNRLLHSPYFGRIDFVEQGTTNVESIYLG
IASLLDADGITFLIYDWRAPIASLYYDYPPGLVKYETPDGEVTGEMLMKRQYMIRDGVIE
LMFDTSVTIGDQLLQKVLGHSSEAQMKSIVATIQREQNQIIRNDRSRMLLVQGVAGSGKT
SAALQRVAYLLYKHRQTLKADQMLLFSPNPMFNSYVSTVLPELGEENMQQTTFQQYLEYR
LNEEYQLEDPFEQLETILSAEENTVEYEARLAGIRFKSSIEFYKVILAYKEVLQHQDILF
KPLVFRGRNVVSVKRMKERFYSYDPAIRLANRIELHRDWLLKELSVFEEKEWREAWLDDE
VQNLDFDDLHHSFKKLRLNQKGKGATFDDYDKQYEVLARWVVQEKLNPIRHRIQTLRFVD
VLGLYRQLFRDDNALSISASKHIQLPDNWHDICEQTLLRLEKLQLSYEDATPFLLIKDLV
HGYQSNHSIRYVIIDEVQDYSAFQLEFIKHLFPRSKMTALGDLNQAIYAHASILHESQPV
MEMYGAAQTELIRLVNSYRSTRQIVEFTRGIVQGGDQIMPFNRPGEKPQIIVVDDHEQLH
KRILIDIEAFLARGFASIAIICKTAKESEAAYEAMKEQLPLLLITKNTILFEKGIQVIPA
YLAKGVEFDAVILYNGSKEQYRRENERKLFYTACTRAMHELFIYSLGELSPFLSALNAET
YERKEYVDQNVSR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaacggaaagcgattggcagtttgaacaacaacgcatggagcatgttaatgat
caattaaaccaacgtatggaacaattagcacaggaagttgggctggtcaaaggtgacatt
ggggatattcgcaaaaacttttgggacggcattacaataaatttaggcaaccctgatgat
atgggcgaaacattttttagtattaaacaacaggctgatgttatttctgagcgtgaacgg
atgcataagcttgctgttgttactttagataaacttaatcgattgctgcattctccttat
tttggcaggattgattttgtcgaacaaggtacgactaatgtggaatctatttatctggga
attgcttcgcttttggacgcagatggcattacgtttctgatttatgactggcgtgctccc
atagctagcctttattacgattacccgcctgggctagtgaaatatgaaactcccgatggt
gaagtaaccggtgaaatgctgatgaaaaggcaatacatgattcgcgacggagtcattgaa
ttgatgtttgatacgagtgtgacgattggggatcaactgctgcagaaggtattgggccat
tcttcagaagctcaaatgaagagtattgtcgccaccatccagagggaacaaaaccagatc
atccgcaatgatcgtagccgcatgctgctagttcaaggagttgcaggtagtgggaaaact
tctgctgctttgcaaagagtagcgtaccttttatacaaacaccgtcaaaccttaaaagca
gatcagatgctcttgttctcaccaaatccgatgttcaatagctatgtgtctacagtactg
ccagagctcggagaagagaatatgcaacaaacgacctttcaacagtatctggagtaccgt
ttaaatgaggaatatcaattagaggatccgtttgaacaactggaaaccattcttagtgct
gaagaaaatacagtcgagtatgaagccagacttgcaggtattcgctttaaatcttcaatc
gaattctataaggttattctcgcctataaggaagtgctgcagcaccaagatattctattc
aagccgcttgtttttagaggacgcaatgtcgtttccgtaaaacgaatgaaggaacgcttc
tacagctatgatccagcaattcgacttgctaaccgcatcgagctgcatcgggattggttg
cttaaagaattaagtgtatttgaagagaaggagtggcgtgaggcgtggttggacgatgaa
gtgcagaatctggattttgatgatttgcatcattctttcaagaagctgcgtttaaatcaa
aaaggtaaaggcgctacttttgatgattatgacaagcagtatgaggtattggcgcgatgg
gttgtccaagaaaaattaaacccgattcgtcatcgtattcaaactctgcgatttgtcgat
gttttgggactatatcgtcaattatttagggatgataacgccttatccattagcgcctct
aagcatattcagttgcctgataattggcacgacatctgcgaacaaaccttgttaaggctg
gaaaaattacagctttcctacgaggatgctacaccttttttgttaattaaagatttggtt
cacggctatcagtccaaccattctattcgatatgtaatcattgacgaagtgcaggattac
tcggcttttcagcttgagtttattaagcatctgttcccacgcagtaaaatgacggcttta
ggtgacttgaatcaagcgatatatgcgcatgcgtccattcttcatgaatctcagccggtt
atggaaatgtatggtgccgcccaaaccgaattaattcgtttagtgaatagctatcgttcc
actcgtcagatagttgaatttacccgtggcattgtccaaggcggcgatcaaattatgccc
tttaaccgtcctggagagaaaccgcaaatcattgtcgtagatgatcatgaacagcttcac
aaacgcatactcatcgatatagaagcttttcttgccagaggctttgcctccattgcgatc
atttgtaaaacagctaaggaaagtgaagccgcctatgaagcaatgaaggaacaattacct
ttactgctcattaccaagaacaccattttgtttgaaaaaggcattcaagttattcccgca
tatttggccaagggggttgaatttgacgcagttatcctctataacggttccaaagaacaa
tataggcgggagaacgaacgaaagctcttttatacagcttgcacaagagccatgcatgaa
ttgttcatatactcattaggtgagctaagtcctttcctaagcgcattgaatgcagagact
tatgagaggaaggaatacgttgaccagaacgttagtcgttag
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