Paenibacillus psychroresistens: EHS13_22015
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Entry
EHS13_22015 CDS
T06328
Definition
(GenBank) ribonucleoside-diphosphate reductase
KO
K00525
ribonucleoside-diphosphate reductase alpha chain [EC:
1.17.4.1
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc00230
Purine metabolism
ppsc00240
Pyrimidine metabolism
ppsc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
EHS13_22015
00240 Pyrimidine metabolism
EHS13_22015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_22015
Enzymes [BR:
ppsc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.4 With a disulfide as acceptor
1.17.4.1 ribonucleoside-diphosphate reductase
EHS13_22015
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Modulation of nucleotide pools
EHS13_22015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuc_red_lgC
LAGLIDADG_3
Intein_splicing
Hint_2
ProQ_C
Ribonuc_red_lgN
Motif
Other DBs
NCBI-ProteinID:
QGQ97367
UniProt:
A0A6B8RNE9
LinkDB
All DBs
Position
complement(4821566..4825267)
Genome map
AA seq
1233 aa
AA seq
DB search
MDTVQTTRLEGLSEKIFLDRYALKDADTNNTKVGDLVLALTKDDAKFPAKEVGEVIKREG
NRVSIKLSSGDIIETTIEKLTLTKEKTPDQLWKRLAGAMASVEFTPEKQKEWTDKFKYIL
QDWKLVPGGRIAAGADASDELTLFNCYVIPSPQDSRGGIMKTLTEMTEIMARGGGVGINL
SSLRPRRAIVKGVNGASSGAVSWGGLFSYATGLIEQGGSRRGALMLMINDWHPDLVDFIT
VKQTAGQVTNANLSVCVSNGFMKAVKEDLDWDLVFPDTNDADYNTLWDGSLEKWKALGKA
VKLIQTVKAREVWKIIIESAWKSAEPGVVFMERYNEMSNSWYFNPIICTNPCFHADTRIS
TEFGLIRIDDLFNKVGMGHFLAATDDRIMNEVQVVNGRSYAVPGTTMRRARVFPTGVKQT
LKIELANGMELKVTPDHRILTQLGWKEAKDLTYEDQVYIQSGAGQFAAEDELGRDWGLFL
GWLTGDGWISQRGDIGMVFGKEDEEVVARMVEIGLRLTGTEAKVFEREGGTKQVYWWKKH
FRDQLLKLGVKQVKAPEKEVPAALFTSTRETVIAFIQGLFSADGTVYENDEMHRSVRLTS
ASRKLLQDVQLLLLNFGIHGHIYSRAKNNQAQFTYRTIDGVDKSYESKGFFELILSGNNI
LEFQMQIGFSLLNRKQEALERIARPSRKSEKFISQVKIITEGEAVMVYDVNEPATHSLIA
NGVVAHNCGEQGLPAWGVCNLAAVNLSKFYDADKQDVAWDELGKVVRYSTRFLDNVIDKT
PYHFEENKENQQGERRVGLGTMGLAELMIKLEIRYGSPESLTFLDKLYGYMAKEAYIASA
EIAEEKGSFKHFKLDKFLQSGFMKNMVKIYPEVGAAIEKKGMRNVTVITQAPTGSTGTMV
GTSTGIEPYFAFEYFRQSRLGYDKQLVPIAQNWLDKHPNQELPDYYVTSMSLSAEDHIRV
QAAIQTWVDSSISKTANCPADFTVEETARLYELAFDLGCKGVTIYRDGSRDVQVLSTEKK
AAEKESAVAAALPEEELAAEEASANISIKNQEIHDKQYKSRPQILRGATYKVNTPFGMAY
ITINDLNGIPSEIFLNVGKAGSDVFAMSEALGRVCSLFLRYGDHGNKVNLLIKHLKGIGG
SGAIGFGVNRVESIADAVAKSLELHNEGSNNGYVSVVHNPTAPEAATLDYDVTVPSVHTS
STSSKDICPSCGSISLINIEGCKTCSNCGYSKC
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggatactgtgcagaccacgagattagaaggattaagcgaaaagatttttctcgatcgt
tatgctttaaaggatgcagataccaataataccaaggttggcgatctggtattagcttta
actaaagacgatgccaaatttccggctaaagaagttggagaagtcattaaacgcgaaggc
aatcgagtttcaataaagcttagcagtggcgatattatcgaaacaaccattgagaagctt
actttgaccaaagaaaaaacaccagaccagctctggaagcgtctggctggagcaatggca
tctgtagaatttactcccgagaaacaaaaggaatggaccgataaattcaaatatattttg
caggattggaagcttgtgcctggaggacgtattgctgctggtgcggatgcgagtgatgaa
ttaacactgtttaattgttatgtaataccatctccacaagacagtcgtggcgggattatg
aaaacattaactgaaatgactgaaatcatggcacgcggtggtggagtggggattaatctt
tcctctttaagaccacggagagcaattgttaaaggagtcaatggtgcatcaagtggtgct
gtttcatggggaggattatttagttatgctactggtttgatcgagcagggtggtagtcgc
cgcggagcattaatgctgatgatcaatgattggcatcccgatctagtcgactttattacc
gtcaaacaaacggctggacaagttaccaatgctaacttatctgtttgcgtaagtaatggt
ttcatgaaagcggtcaaagaggacttggattgggatttggttttcccagacacgaatgat
gcagattacaatacactgtgggacggcagcctcgaaaagtggaaggcactgggtaaagcg
gtcaagctcattcaaaccgtaaaagcacgcgaggtatggaaaataatcatcgagtcagct
tggaaatcagccgagcccggtgtggtttttatggagcgatataatgagatgtctaatagc
tggtattttaacccgattatttgtactaatccatgctttcatgcagatactcgcatttca
actgaatttggtttaattcggattgatgacctatttaataaagtgggcatgggacatttt
ttggcagctacggatgatcgaatcatgaatgaagttcaagtggttaatgggcgttcctat
gcagtcccaggcacaactatgcggagggctcgtgtttttccaactggggttaaacaaact
ctgaagatagaattagcaaatgggatggagcttaaagttacacctgatcaccgaatcctt
acacaattaggttggaaagaagccaaggatttaacttatgaggatcaagtatacatccaa
tctggagcagggcaatttgcagcagaagatgagctgggtagagattggggcttatttctt
ggatggcttactggggacggctggatttcacagcgtggagatattggaatggtttttggc
aaagaggatgaagaagtcgtagcccgaatggttgaaattggactaagattaacaggaacg
gaagctaaagtattcgaaagagaaggcggaacgaagcaagtttattggtggaaaaaacat
tttagagaccagctgctaaagcttggtgtgaaacaagtaaaagctccagaaaaagaggtc
ccagctgcattatttacttctactcgtgaaaccgtaattgcatttatccaaggattattc
agtgctgatggaaccgtatatgagaatgatgaaatgcaccgatcagttagacttacatcc
gcttcacgtaaattgcttcaagatgttcaattgttgttgcttaattttgggatccatgga
catatctatagtcgagccaagaataatcaagctcaatttacttatcgcacaatcgatgga
gtcgataagtcatatgaatctaaaggattcttcgagttaattctgagtggcaataacatt
cttgagtttcagatgcagatcgggttctcattattaaatcgtaagcaagaagcattggaa
agaatcgcacgtccatcacgtaaaagcgagaaattcatctctcaagtaaaaatcattaca
gaaggtgaggcggtaatggtttacgatgtcaatgagccagcgactcattctttgattgct
aatggggttgtagctcacaactgcggagaacaaggcctaccagcatggggagtttgcaac
ctggctgcagttaatctctctaaattctatgatgctgacaaacaagatgtagcatgggat
gagctcggaaaggtggtgcgttattccacacgttttttagataatgttatcgataagaca
ccgtatcattttgaggaaaataaagagaatcaacaaggagaacgtcgagtaggtttagga
acaatgggacttgctgagttgatgataaagctagaaattcgctatggcagcccagaatca
ctcacttttttggataagctttatggctatatggccaaagaagcctatatcgcctcagcc
gagattgctgaagaaaaaggctcatttaagcatttcaagctggataaatttctccaaagc
ggctttatgaaaaatatggtcaaaatatatccagaagttggagcagcgattgagaaaaaa
ggcatgcgcaatgttactgtaattactcaagcaccaactggcagtacaggaacgatggtc
ggaacatcgacagggattgaaccctatttcgcttttgaatacttccgtcaaagtcgcttg
ggttatgataaacaattagtgccgattgcgcagaattggttggataagcaccctaatcaa
gaactgccggattactatgtaacatcaatgtctctatcggctgaggatcatattcgtgta
caagcagctattcaaacatgggtggacagctctatttccaaaacggcaaattgtccagca
gacttcaccgtagaagaaactgcacgattgtatgagcttgcttttgacctaggttgcaag
ggagtgacgatttaccgtgatggtagccgtgatgtccaagtgctttccaccgagaaaaaa
gcagctgaaaaagaatcggctgtagctgccgccttacccgaagaagaattagctgctgag
gaagcttcagcgaatattagcattaaaaatcaggaaattcacgacaagcaatataaaagt
cgtccgcaaattctgagaggtgcaacttacaaagtaaacacaccattcggaatggcttat
atcacaattaatgatttaaacggcattccaagtgaaatcttcttgaatgtaggtaaagca
ggttccgacgtcttcgcaatgtccgaagcgttaggccgagtttgctccttgttcctccgt
tatggagatcacggcaataaagttaacttgctgattaaacatcttaaaggtattggcggt
tcaggtgcaataggctttggagttaaccgcgttgaatccattgcggatgcagtagctaaa
tcattagagctccataatgaaggcagcaataacggatatgtttcggttgttcataacccg
acagcacccgaagcagccacactggattatgatgtaactgttccaagtgtacacacgtcc
agtacttcgagcaaagatatatgtccatcctgcggatctatttcattgatcaatatagaa
ggttgtaaaacgtgcagtaattgcgggtatagtaagtgttga
DBGET
integrated database retrieval system
