Paenibacillus psychroresistens: EHS13_31190
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Entry
EHS13_31190 CDS
T06328
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03420
Nucleotide excision repair
ppsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHS13_31190
03430 Mismatch repair
EHS13_31190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_31190
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHS13_31190
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHS13_31190
MMR (mismatch excision repair)
Other MMR factors
EHS13_31190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
L31
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QGQ99025
UniProt:
A0A6B8RTX3
LinkDB
All DBs
Position
complement(6965679..6967889)
Genome browser
AA seq
736 aa
AA seq
DB search
MEASEEFFDRKKQELNVTLNEVQKQAVLHGTGPLLLLASPGSGKTTTIIMRIGYLIEVSG
VDPARIKAVTFSKASALDMKERFSRFFPRLPTIDFSTIHSLAFEVVREYYRSTRTNFKMI
EGSLDVTEESNWNADHQPLHKKFILRRLFSTLAGEPITDDQMEELSTYISYIKNKLIPVE
KWALVKCDVPKAEQILLEYEAFKRSGTSQLLVDFDDMLTIGNEAFEKDAKLLSKYQQKYD
FVLTDESQDTSLVQHAIIEKLVSKHGNLSVVADDDQSIYSWRGAEPAYLLNFKDVYPQAV
TLFMEQNYRSSPDIVNVANQFIKRNKNRYEKNMFTVNAPKEPIQIQSFADYQHQVKYLAE
AIREVGELGEVAVLFRNNSSSITLMNEFERVGIPFYIKDADNRFFSHWVVEDILNFMRMT
FTDKRSDLLEKIHNKLSGYVTKQQIQQLKEIDNNESVFDNLLNHVQLQDYQRKILQECKE
TFQQMKGMPPVEAIRVIRTRLGYEKAIEKLCERFGFRKDYLIGILNTLEEIADTLPTMES
FAKRLKHLEQVMKNAKSSKHQNVVTLSTFHSSKGLEFKRVYMIDLIEGVMPSEDDKKKNA
EGQMPLMEEAVRLFYVGMTRAKIKLELLSYTKKDGEKVEESTFINGVRQIIDPPKLVTAE
KITKKEYHLKNINAITAISEIAEGIWVRHATFGLGMVIKLAGKVLEIKFADVGMKSFSSE
ICIENGLLELAQAKKV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagtgaagaattttttgatcgtaaaaaacaagaattaaacgttactttaaat
gaagtgcagaagcaggcagtgcttcatggcactggaccactgctcctgttagcttctcct
ggatcaggtaaaacgacaacaattattatgcgaattggctatcttatagaggtttcaggt
gttgatccagcaagaattaaggcggtcacgttcagtaaggcatcggctcttgatatgaag
gagcgtttcagtcgtttctttcctagactcccgacaattgatttttcaactattcatagc
ttggcttttgaggtagttcgagagtattatcgcagtactagaacgaatttcaaaatgatc
gagggcagccttgatgtaaccgaagaatccaattggaatgcggatcatcagcccttgcac
aagaaattcattctccggagattgtttagcacgcttgcgggcgagcctattaccgatgat
cagatggaagagctgagtacttacattagctacattaagaataaacttattcccgttgaa
aaatgggctttggttaaatgtgatgtgcctaaagccgagcaaattctactagaatatgaa
gctttcaaacgatcaggtacaagccagctgctagtagattttgatgatatgctgacgatc
ggcaacgaggcttttgagaaggatgccaagctattaagcaaataccagcaaaaatatgac
ttcgtgcttacggatgaaagtcaggatacttccttggtgcagcatgcaattattgaaaag
ctagtgagcaagcatgggaatctcagtgttgtggcagatgatgatcaatcgatttatagc
tggcgtggagcggaaccggcgtatttacttaattttaaagatgtttatccgcaggcagtt
accttattcatggaacagaactatcgatcctccccggatatagttaatgtggcaaatcaa
tttataaagcgcaataagaaccgttatgagaaaaatatgtttacagtgaatgctcctaag
gaacccattcaaattcaaagctttgccgactatcagcatcaggtcaaatatctagcagaa
gcgattcgcgaggtcggggagctgggcgaggtagctgtgctttttcgcaataattcttct
tcgattacattgatgaacgagtttgaacgtgtgggtatccctttctatattaaagatgcg
gacaatcggtttttctctcattgggttgttgaagatatacttaactttatgcggatgact
tttaccgataagcgttccgatctattggagaaaattcacaataaactaagcgggtatgtg
accaagcaacaaattcagcagctcaaggaaattgacaacaatgagtctgttttcgataac
ctgttaaaccacgtacagctgcaggactatcagcgcaagattctccaagagtgcaaagaa
acctttcagcaaatgaaaggcatgcctccggttgaagcgattcgagtgattcgtactaga
ttaggctacgagaaagcgattgaaaaactctgcgagcggtttggctttcgtaaggattat
ttgatcggtatccttaatacactggaagaaattgcggatacactgcctacgatggagtct
tttgccaagcggttgaagcatttagagcaggtgatgaaaaatgcgaaatccagcaagcat
cagaatgtagtgaccttatccacttttcatagctcgaagggattggagtttaagcgtgtc
tatatgattgatttaattgaaggcgtgatgccctcggaggatgataaaaagaaaaatgcc
gaaggtcaaatgccgttgatggaagaagctgttcgcttattctatgtgggaatgacacgg
gcgaagattaagctcgagctgctatcctatacgaaaaaagatggagaaaaggtcgaggaa
tctacttttattaatggagttaggcaaattatcgaccctcctaaactagtaacggctgag
aaaataaccaaaaaggaatatcatcttaaaaatataaatgccattacagcgatttcggag
atagcagaaggcatctgggttcgacacgcgacttttggactgggtatggtgatcaagctt
gcaggtaaagtgcttgaaatcaagtttgcagatgtaggaatgaagtctttttctagtgaa
atctgtattgaaaatggacttctggagcttgctcaagcaaagaaagtttaa
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