Pseudomonas pseudoalcaligenes: BN5_1887
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Entry
BN5_1887 CDS
T03772
Symbol
uvrC
Name
(GenBank) DNA repair system
KO
K03703
excinuclease ABC subunit C
Organism
ppse
Pseudomonas pseudoalcaligenes
Pathway
ppse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN5_1887 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_1887 (uvrC)
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN5_1887 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
UVR
HHH
HHH_2
HHH_3
5_3_exonuc
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
CDM40462
UniProt:
W6QVG2
LinkDB
All DBs
Position
2011819..2013642
Genome browser
AA seq
607 aa
AA seq
DB search
MPAPFDPSAFLATCSGRPGVYRMFDSEARLLYVGKAKNLKKRLSSYFRKTGQAPKTAALV
ARIAQIETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGEFPRLGIHRG
AKKARGRYFGPYPSALAIRESLSLLQKTFLVRQCEDSYYKNRTRPCLQYQIKRCKGPCVG
LVSPEEYAEDVRHSVMFLDGRSNALSEELSSAMEKASMALEFERAAELRDQIALLRRVQD
QQSMDGGTGDVDVVAVMLTPGGACVHLISVRGGRVLGSKNFFPQVAIEEEGGDVLMAFLA
QYYLGNAERDLPSELIVNVQHEDFATLIEAIESLRGRSLSISLRVRGTRARWQQLAVTNA
EQALAARLVNRQHLAERFEALATVLEMDEPPQRMECFDISHSSGEATVASCVVFGPEGPL
KSDYRRFNIEGVTAGDDYAAMHQALTRRFSKIKDGEGKLPDVLLVDGGKGQLAMAREVLQ
ELAVPDLILLGVAKGTTRKPGLEVLYLNDAEHEFTLPGNSPALHLIQQIRDESHRFAITG
HRARRGKTRRTSTLEEVPGIGPKRRRELLNHFGGLQELSRASAEEIAKAPGINKKLAESI
YDTLHSE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccccattcgatccgagtgccttcctggcgacctgcagtggtcgccccggcgtc
tatcgcatgttcgatagcgaggctcgcctgctctacgtcggcaaggcgaaaaacctcaag
aagcgtctctccagttactttcgcaagaccggtcaggcacccaagacggccgcgctggtc
gcacgtatcgcgcagatcgaaaccaccatcaccgccaacgagaccgaggcactgctgctc
gagcagaccttgatcaaggaatggcggccgccttacaacatcctgctgcgcgacgataaa
tcctatccttacgtgtttctctctgacggtgagtttccgcgtctgggcatccatcgtggt
gccaagaaggccagggggcgctacttcggcccctatcccagcgccctggcgattcgtgaa
agcctgagcctgttgcagaagacctttctggttcgccagtgcgaggacagctactacaaa
aaccgcacgcgaccctgcctgcagtaccagatcaagcgctgcaaaggcccctgcgttgga
cttgtcagtcctgaggaatacgctgaagacgtgcgccattcggtgatgttcctcgacggc
cgcagcaatgccttgagcgaggagctttccagcgccatggaaaaggcatctatggcgctg
gagttcgagcgcgccgccgagctgcgcgaccaaatcgcactgctgcgccgtgtgcaggat
caacaaagcatggacggcggcaccggcgacgtcgatgtggtcgcggtgatgctcacgccg
ggtggcgcctgcgtacacctgatcagcgtgcgtggtgggcgtgtactgggtagcaagaat
ttcttcccgcaggtggcgattgaggaggagggcggcgatgtgctgatggccttcctcgct
cagtactacctgggcaatgccgagcgcgatctgcccagcgagctgatcgtcaacgtgcag
catgaagacttcgccacgctgatcgaggccatcgagtcgctacgcggccgtagtctcagc
atcagcttgcgcgtgcgtggcacgcgtgcgcgttggcagcagcttgccgtgaccaacgcc
gaacaggcgctggccgcacgcctggtcaaccggcagcatctggccgagcgtttcgaggcg
ctggctaccgtgctggaaatggacgagccgccgcagcgcatggaatgcttcgatatcagc
cattccagtggtgaggcgacggtcgcctcatgcgtggtattcggtcccgaaggtccgctg
aaatccgattaccggcgcttcaatatcgagggagtgaccgctggcgacgactacgccgcg
atgcaccaggcgttgactcggcgcttcagcaagatcaaggatggcgaaggcaagttgccc
gatgtgctgctggtggacggtggcaaggggcagttggccatggcgcgcgaggtactgcag
gagctggccgtgccggatctgattctgcttggtgtggccaagggcacgacgcgcaagccg
ggcctggaagtgctttacttgaacgatgccgagcatgagttcaccttgcccggcaactcc
ccggcactgcatctgattcagcagatccgtgacgaatcgcaccgctttgcgatcaccggg
caccgtgcgcgacgcggcaagacccgacgtacctctacattggaagaagtgcctggtatc
ggccccaagcggcggcgcgaattgctcaaccacttcggcggcctgcaggaattgtcccgt
gccagcgctgaagaaattgccaaagcgcccggaatcaataaaaagctcgctgagtcgatt
tatgacactctgcacagcgagtag
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