Pseudomonas psychrophila: G5J76_21520
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Entry
G5J76_21520 CDS
T06988
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsh03016
]
G5J76_21520 (truD)
Enzymes [BR:
ppsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
G5J76_21520 (truD)
Transfer RNA biogenesis [BR:
ppsh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G5J76_21520 (truD)
Prokaryotic type
G5J76_21520 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QIE34685
LinkDB
All DBs
Position
complement(4762735..4763793)
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AA seq
352 aa
AA seq
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MNESDLLGPRAYGEALGTAVLKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSGAENDTLKILKTSRHKR
KLQRGAHAANGFTLRLTQLAGDKDALQQRLERIAKQGVPNYFGTQRFGWQGGNVGEARDY
AARKALPEQRNVRSRLLSTARSYLFNQVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLGILDLHPTGPQWGEGESPTTGATHALEQSIAEREADLRDWLVRAGMSHERRI
LRLPIGRLTWHYPQPDVLQLEFVLPAGCFATVLVRELVDLVPLDQADSLCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtctgatctgctcggcccgcgggcctacggcgaggcgctgggcactgctgtg
ctcaaagcgacggctgaagattttcaagtcgacgaagtgcttgatataccgctgtccggt
gatggcgagcatctgtggttgtgggtcgagaaacgcggcctgaacaccgaggaagccgcg
cgccgcatcgccaaggcggcgggcgtgcctttgcgtacggtcagttacgcgggtctcaag
gaccgccaggcgttaacccgccaatggttcagcgtgcagttgccgggcaaggcagaccct
gacttgtcgggcgctgaaaacgacactctgaaaattctcaagacctcacgtcacaagcga
aaattacagcgaggcgcccacgcggccaacggtttcacattgcgcctgacgcagctggcc
ggggacaaggacgcgctgcagcaacgccttgaacggatcgccaaacagggtgttcctaac
tatttcggcacccagcgattcggctggcaaggtggcaacgtgggggaggcgcgtgattat
gctgcgcgcaaggccttgcctgagcagcgtaatgttcgctcgcggctgctttccaccgct
cgcagctatctgttcaatcaggtgctggcagcgcgggtggctgatggtagctggcagcgg
gcgcaggtcggcgatttgctggcctttaccgacagccgcagttttttcccggcgggcgag
gctgaatgcagcgatccgcggctgggcattctcgatctgcaccccaccggcccgcagtgg
ggcgagggcgagtcaccgaccaccggcgcgacccatgcgttggagcagtcgattgcagaa
cgcgaagcggacttgcgtgactggctggttcgcgcgggcatgagccatgagcgacgtatc
ctgcgactgcccattggccgattgacgtggcattatccgcagcctgacgttttgcaactg
gaatttgttctgccggccggatgcttcgccactgttctggtgcgcgagcttgttgatctg
gtgcctttggatcaagcggatagcctatgcgtattctga
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