Pseudomonas psychrotolerans: BJP27_19575
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Entry
BJP27_19575 CDS
T05074
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppsl
Pseudomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_19575
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJP27_19575
Archaeal homologous recombinant proteins
BJP27_19575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FliT
Motif
Other DBs
NCBI-ProteinID:
APQ14554
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Position
4332887..4334092
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AA seq
401 aa
AA seq
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MRLLHTSDWHLGQHFLGRTREAEHRAFLAWLVAQVEEQQVDVVLVAGDIFDTATPPSYAR
ELYNGFIVALRGTGASLVVLGGNHDSAAVLAESRELLACLDTRVIPCVSATPADQLLELR
RRDGEIGALLCGIPFVRPRDVVQSQAGQSADEKRQALQQAIQGHYAELHGLAEARRAELG
GALPIIATGHLTTVGASASESVREIYVGSLDAFPTSAFPPADYIALGHIHRPQRVGGLEH
VRYSGSPLCLSFDEERAKEVLLVEFGQGLERVTPLAVPCFQPLAVVQGTLEELGAALTQA
AVDGSAECPVWAEVVVAGDDYLADLQTRISALVAELPLEVLRVRRARSVAAPTLQGTQRE
TLEELSPLDVFQQRLADEQLDDELRIRLEGLYREVLGEMPA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ctgcggctgctgcacacctccgactggcatctggggcagcacttcctcgggcgtacccgc
gaggccgagcatcgtgcctttctggcctggctggtcgcccaggtggaggaacagcaggtg
gacgtggtgctggtggcgggggacatcttcgataccgcgaccccgccgagctatgcccgc
gagctgtacaacggcttcatcgtcgctctgcgcgggacgggggccagcctggtggtgctg
gggggcaaccatgattccgccgcggtcctggcggaatcccgcgagttgctggcctgcctg
gatacccgggtgatcccctgtgtcagcgcgacaccggcggatcagctactggaactacgt
cggcgtgacggcgagatcggcgcgctgctctgcggcattcccttcgttcgcccgcgggac
gttgtgcagagccaggcggggcagagcgccgacgagaagcgccaggcgctgcaacaggct
atccaggggcattacgccgaactgcacggtctggccgaggcgcggcgtgccgagctaggc
ggcgccctgccgatcatcgccaccggccacctgaccaccgtgggtgccagcgccagcgag
tcggtgcgggagatctacgtcggcagcctcgatgcctttccgaccagtgccttcccgccg
gcggactacatcgccctcggccatatccaccgaccccagagggtcggcggcctggagcac
gtgcgctacagcggctcgccgctgtgcctgagcttcgacgaggaacgtgccaaggaggtc
ctgctggtggaattcggccagggcctggagcgggtgacgcccctggcagtgccctgtttc
caaccgctggcggtggtacaggggacgctggaagaactcggggcggcgctcacccaggcg
gcggtcgacggcagtgccgagtgtccggtatgggccgaggtggtggtggccggcgatgac
tacctggccgatctgcaaacgcgcatcagtgcgctggtcgccgaattgccgctggaagta
ctgcgggtgcgccgggcgcgcagcgtggcggcgcctaccctgcaaggcacccaacgcgag
acactggaagaactcagccccctggacgtcttccagcagcgcctggcggacgagcaactg
gacgacgaactgcgcatccggctggaagggctttaccgcgaggttctcggcgagatgccg
gcctga
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