Peribacillus psychrosaccharolyticus: I6J18_12825
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Entry
I6J18_12825 CDS
T07206
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
ppsr
Peribacillus psychrosaccharolyticus
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsr03021
]
I6J18_12825 (sigB)
Transcription machinery [BR:
ppsr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J18_12825 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
GerE
IF2_N
HTH_3
DUF1492
HTH_37
HTH_28
DUF433
HTH_16
DUF134
SieB
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QQS98616
UniProt:
A0A974RYL7
LinkDB
All DBs
Position
complement(2514263..2515051)
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AA seq
262 aa
AA seq
DB search
MQRHSQPNQMTKDKVNAWIKAYQLHQDEEAQQQLVLHYKGLVETIARKYSKGRSFQEDIS
QVGMIGLLGAIRRYDETFGKSFEAFAVPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIRV
TVEELTTELHRSPRIDEIAEHLDVPEEEILEAMEMGKSYQALSVDHSIEADSDGGTVTLL
DIFGNVDEGYERVNQRLVLEKVLHVLTEREKMIIQYTYLENLSQKEAGEKLDISQMHVSR
LQRRAIKKLQVAINAENNTESL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacactctcaacctaatcagatgactaaagacaaggtcaatgcttggattaaa
gcgtaccaactccatcaagatgaggaagctcaacaacaacttgttcttcattataaaggc
ttagttgaaacgattgcgcgaaagtattcaaagggaagatcctttcaagaagatatctct
caagtagggatgatcggattgcttggcgcaattcggcgatatgatgaaaccttcggaaag
agttttgaagcttttgcagtaccaaccatcatcggtgaaattaaacgtttcttacgtgat
aaaacatggagtgttcatgttccgcgtcgaatcaaagaacttggaccgaaaattcgggtt
acggttgaagaacttacaacagaacttcatcgttcacctagaattgatgagattgcagag
catcttgacgtacctgaagaagaaattctagaagcgatggaaatgggaaaaagctatcaa
gctttatcggttgatcactctattgaagcggattcagacggaggaactgttacacttctg
gatatcttcggaaatgttgacgagggctatgaacgggttaatcaacgccttgttctggaa
aaggttctacatgtattgactgagagagaaaagatgattattcaatatacgtatcttgaa
aaccttagtcaaaaagaagcaggagaaaaactagatatttcccaaatgcatgtatcacgt
cttcaacgaagagcgattaagaaactgcaagtggctataaatgcagaaaataatacggag
tctctataa
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