Pseudomonas putida HB3267: B479_14095
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Entry
B479_14095 CDS
T02389
Name
(GenBank) EvpB family type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
B479_14095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppuh02044
]
B479_14095
Secretion system [BR:
ppuh02044
]
Type VI secretion system
Imp/Vas secretion system core components
B479_14095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
TssC
TSP_NTD
Motif
Other DBs
NCBI-ProteinID:
AGA73713
LinkDB
All DBs
Position
3096249..3097751
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AA seq
500 aa
AA seq
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MTDKQTAPQQAGDLVEVENFAPQASLLDSIISQSRVARSDTERNRTRDLIGELVNQVLEG
EMTPSKDLIAVLDSRIAEIDSMLSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTTLK
IHLLNASKKDLVRDLKAASEFDQSALFKKVYEEEYGTFGGAPFGMLIGDYEFNRNPEDMY
LLEEISHVAAAAHAPFISAASPELFGWDSFTEMSGPRDLAKIFDTVEYAKWKSFRASEDS
RYVGLTLPHVLGRLPYGPDTTPVEEFNFVESVDGRDHNKYLWMNAAYALGTRVTDAFARY
GWCVAIRGVEGGGLVEGLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCK
GTDYAAFFGTQSAQKQKQYNTDIANANARLSAQLQYIFATSRIAHYMKAIMRDKIGSFAS
RMDVERFLNQWLASYVLLDDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQ
LDELTASLRLVAELPQGARG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagcaaaccgcaccgcaacaggccggcgacctggtcgaagtggaaaacttc
gcgccacaggcatcgttgctcgacagcatcatttcgcaaagccgcgtggcccgctccgac
accgagcgcaaccgcacccgcgacctgattggcgaactggtgaaccaggtgctcgagggc
gagatgaccccgagcaaggacctgatcgccgtgctcgattcgcgtatcgccgagatcgat
tcgatgctttccgagcagatgaacgaaatcatgcacgcccgtgagttccaacagctggaa
gcctcctggcgcggcctgaaataccaggtagaccagaccgagaccagcaccacgctgaag
atccacctgctcaatgcctcgaagaaagacctggtacgcgacctgaaggccgccagcgaa
ttcgaccagagcgcgctgttcaagaaggtctacgaagaagagtacggcaccttcggcggc
gcgcctttcggcatgctgatcggtgattacgagttcaaccgcaaccccgaagacatgtac
ctgctggaggagatctcgcacgtcgccgcagcagcccatgccccgttcatttcggccgcc
tcccccgagctgttcggctgggactcgttcaccgagatgtccggcccgcgtgacctggcg
aagatcttcgacaccgtggaatacgccaagtggaagtcgttccgcgcttcggaagactcg
cgctacgtcggccttaccctgccgcacgtgctcggtcgcctgccgtatggcccggacacc
accccggtggaggaattcaacttcgtcgaaagcgtcgatggccgcgaccacaacaagtac
ctgtggatgaacgctgcctatgccctcggcacccgcgttaccgatgccttcgcccgctac
ggctggtgcgtggccatccgcggcgtggaaggtggcggcctggtcgaaggtttgccaacc
cacaccttcaagaccgacgacggcgaaatcgccctcaagtgcccgaccgaaatcgccatc
accgaccgccgcgaaaaagagctgtcggacctgggcttcattcccctggtgcactgcaag
ggcaccgactatgccgcgttcttcggcacccagtcggcgcagaagcagaagcagtacaac
accgacatcgccaacgccaacgcgcgcctgtcggcccaactgcagtacatcttcgccact
tcgcgcatcgcccactacatgaaggccatcatgcgcgacaagatcggtagcttcgcctcg
cgcatggatgtggagcgcttcctcaaccagtggctggccagctacgtgctgctcgacgac
accgccagccaggaagccaaggccaagttcccgctgcgcgaagcccgcgccgaggtgttc
gaagtgccgggcaagccaggtgtgtacaaggccgtgacctacctgcgcccgcactaccag
ctggatgagctgaccgcttcgctgcgcctggttgccgagctgccacagggcgcgcgcggc
tga
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