Pandoraea pulmonicola: RO07_16555
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Entry
RO07_16555 CDS
T03553
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul00630
Glyoxylate and dicarboxylate metabolism
ppul00680
Methane metabolism
ppul01100
Metabolic pathways
ppul01120
Microbial metabolism in diverse environments
ppul01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RO07_16555
09102 Energy metabolism
00680 Methane metabolism
RO07_16555
Enzymes [BR:
ppul01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RO07_16555
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_6
Fer4_9
Fer4_2
Fer4_15
Fer4_4
Fer4_16
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AJC21689
UniProt:
A0A378Z2G8
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All DBs
Position
complement(1868368..1871232)
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AA seq
954 aa
AA seq
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MMDPMFEKDYGTPRRESAQEVTLEIDGEQITVPAGTSIMRAAAESGVNVPKLCATDSLEP
FGSCRLCLVEIEGRRGFPASCTTPVEPGMKVRTQTPKLQELRKGVMELYISDHPLDCLTC
AANGDCELQDMAGVTGLREVRYGFDGANHFDSEKDESNPYFTYDASKCIVCNRCVRACEE
TQGTFALTISGRGFEARVSPGQDQPFMDSECVSCGACVAACPTATLQEKSVIHLGQAEHA
KITTCAYCGVGCSFKAEMKGNEVVRMVPHKDGQANEGHACVKGRFAWGYATHKDRILTPK
IRKKITDPWQEVSWDEALDYAASEFKRIQAKYGRDSIGGLVSSRCTNEEDYLVQKLVRAA
FGNNNVDTCARVCHSPTGYGLKATLGESAGTQTFKSIEKSDVILVMGANPTDGHPVFGSR
MKKRLRQGAKLIVIDPRRIDLVKSPHINADYHLQLRPGTNVAMINALAHVIVTEGLMADA
FIAERCEDRAFREWRDFITRAENSPEASEAHTGVPAHLVRGAARLFATGGNAAIYYGLGV
TEHAQGSTTVIGIANLAMLTGNIGRDGVGVNPLRGQNNVQGSCDMGAFPHELPGYRHVSD
STARALFEAEWGVTLQPEPGLRIPNMFDAALAGTFMGLYCQGEDIVQSDPNTQHVTHALE
QMECIVVQDIFLNETAKYAHVLLPGSSFLEKDGTFTNAERRISRVRQVMPPRAGYADWEV
TIQLAKRLGYEMNYSHPSEIMDEIARLTPTFTGVSYEKLDRMGSVQWPCNEAAPEGTPVM
HIDEFVRGKGKFLITQYVPTDEKVTRRFPLILTTGRILSQYNVGAQTRRTDNVHWHSEDR
LEIHPHDAEERGIKDGDWVGIESRAGETVLRAIVSERVQPGVVYTTFHFPESGANVITTD
NSDWATNCPEYKVTAVQVTPVAQPSEWQRQYSDFNRQQEALLGHAHNTAEAGTT
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccgatgtttgagaaggactacggcacaccgcgccgcgaatcggcgcaggaa
gtcacgctggagatcgacggcgaacagatcaccgtgcctgcgggcacgtcgatcatgcgc
gccgcggccgaaagcggcgtgaatgtgcccaagctgtgcgccaccgactcgctcgagccg
ttcggttcgtgccgtctttgcctggtcgagatcgaaggccgccgcggcttccccgcctcg
tgcacgacgccggtcgagcccggcatgaaggtgcgcacgcaaacgccgaagctgcaggaa
ctgcgcaagggcgtgatggagctctacatctccgatcacccgctcgactgcctcacctgc
gcggccaacggcgactgcgaactgcaggacatggccggcgtgacgggcctgcgcgaagtg
cgctacggcttcgatggcgcgaaccacttcgacagcgagaaagatgagtcgaacccgtac
ttcacctacgacgcctccaagtgcatcgtctgcaaccgctgcgtgcgcgcgtgcgaggaa
acgcagggcacgtttgcgctgacgatctccggtcgcggcttcgaagcccgcgtctcgccg
ggtcaggaccagccgttcatggattccgagtgcgtgtcgtgcggtgcatgcgtcgcggca
tgcccgacggccacgctccaggagaagtccgtgatccatctcggccaggccgagcacgcc
aagatcaccacctgcgcctattgcggcgtgggctgctcgttcaaggcggagatgaagggt
aatgaagtcgtgcgcatggtgccccacaaggacgggcaagccaacgaaggccacgcctgc
gtgaagggacgcttcgcctggggctatgccacgcacaaggaccgcatcctcacgccgaag
atccgcaagaagatcaccgacccgtggcaggaagtgtcgtgggacgaggcgctcgactac
gcggcgtcggagttcaagcgcattcaggccaagtatggccgcgactcgatcggcgggctc
gtgtcctcgcgctgcacgaacgaggaggactacctcgtgcagaagctcgtgcgggccgcg
ttcggcaacaacaacgtggacacctgcgcgcgcgtttgccattcgccgacgggctacggc
ctgaaggccacgctgggtgaatcggccggcacgcaaacgttcaagtcgatcgaaaagtcg
gatgtgatcctggtgatgggcgcgaacccgaccgatgggcatccggtgttcggctcgcgc
atgaagaagcgtctgcgtcagggcgcgaagctgatcgtgatcgatccgcgtcgcatcgat
ctggtcaagagcccgcacatcaacgccgactatcacctgcagttgcgcccgggcaccaac
gtggcgatgatcaatgcactcgcacacgtgatcgtcaccgaagggctgatggccgacgcg
ttcatcgccgagcgctgcgaagatcgtgcattccgggagtggcgcgacttcatcacccgc
gccgaaaactcgccggaagccagcgaagcgcataccggcgtgcccgcccacctcgtacgc
ggcgcggcgcgcctgttcgcgacgggcggcaacgcggcgatctactacggcctcggcgtg
accgagcatgcgcaaggttcgaccacggtcatcggcattgccaatctcgccatgctcacc
ggcaacatcggccgcgacggcgtgggcgtgaacccgctgcgcggtcagaacaacgtgcag
ggttcgtgcgatatgggcgcgttcccgcacgaactgccgggctaccgccacgtgtcggac
tcgaccgcccgcgcgctgttcgaagccgaatggggcgtgacgctgcagccggagccgggc
ctgcgcatcccgaacatgttcgacgccgcgctcgcgggcaccttcatgggtctgtactgc
cagggtgaggacatcgttcagtccgatccgaatacgcagcacgtgacgcacgcgctcgag
cagatggagtgcatcgtggtgcaggacatcttcctgaacgagaccgccaagtacgcgcac
gtgctgttgccggggtcgtcgttcctcgaaaaggacggcaccttcaccaacgccgagcgt
cgcatctcgcgcgtgcgccaggtcatgccgccgcgcgcgggctacgccgactgggaagtg
acgatccagttggccaagcgcctgggctacgagatgaattactcgcacccgtcggagatc
atggacgagatcgcgcgcctcacgccgacgttcaccggcgtgagctacgagaagctcgac
cgcatgggcagcgtgcagtggccatgcaatgaagcggcgcccgaaggcacgccggtcatg
cacatcgacgagttcgtgcgcggcaagggtaagttcctgatcacgcagtacgtaccgacg
gacgaaaaggtcacgcgccgcttcccgctcatcctcacgaccggacggattttgtcgcag
tacaacgtcggcgcccagacgcgccgcaccgacaacgtccactggcacagcgaggaccgg
ctcgagatccatccgcacgatgccgaggagcgcgggatcaaggacggcgactgggtcggc
atcgagagccgcgcgggcgagacggtactgcgcgccatcgtgagtgagcgcgtgcagccg
ggtgtcgtgtacaccacgttccacttcccggagtcgggcgcgaacgtgatcaccaccgac
aactccgactgggcaacgaactgccccgagtacaaggtaacggccgtgcaggtcacgccg
gtcgcgcagccttcggaatggcaacgccagtactcggacttcaaccgtcagcaggaagcg
ctgctaggccacgcgcacaacacggccgaagccggcacgacttga
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