Pseudomonas putida DOT-T1E: T1E_2046
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Entry
T1E_2046 CDS
T02181
Symbol
soxB
Name
(GenBank) sarcosine oxidase beta subunit
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
ppx
Pseudomonas putida DOT-T1E
Pathway
ppx00260
Glycine, serine and threonine metabolism
ppx01100
Metabolic pathways
Module
ppx_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T1E_2046 (soxB)
Enzymes [BR:
ppx01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
T1E_2046 (soxB)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
T1E_2046 (soxB)
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Gene cluster
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Motif
Pfam:
DAO
Pyr_redox_2
FAD_binding_2
Thi4
FAD_binding_3
NAD_binding_8
Pyr_redox_3
FAD_oxidored
Trp_halogenase
NAD_binding_9
DUF6832
Motif
Other DBs
NCBI-ProteinID:
AFO47894
UniProt:
I7C829
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All DBs
Position
complement(2241638..2242879)
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AA seq
413 aa
AA seq
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MPFNLLKYGLSSEYPVEVDLPAPKALKPSYDVVIIGGGGHGLATAYYLSKYHGITNIAVL
EKGYLGGGNTARNTAVIRSNYLTSEGVRFYAESVRMFEGLSNEFDFNIMYSHRGQLTLAH
TDATVRSFRQRAEVNKHFGGRTEMLDRQQIRELVPTLNLDPGHLPVIAGLWHIDGATARH
DAVAWGYAKQAAKRGVEIHQLTEVQELVIENGTIKAVKTNRGTIQCGCAVQAVAGMSSQL
MKKAGIRSPIQTFPLQAMVTQPFKPFLDPLVSSSALHCYVQQTSRGEVVFGGGSDPYPLF
NTRSTLDLKESLLAHAIEMFPFLANAKLMRQWAGITDMTPDYSPIMGLSPVKNYYLDAGW
GTWGFKATPICGKTMAELVASGGKVPELIKPFGLERFSTFQQVNEMGATAASH
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcaatctcctgaaatacgggctcagctctgaatacccggtcgaagtggatttg
cctgctcccaaggcgctcaaaccttcctacgatgtggtaatcatcggcggcggtggccat
ggcctggcaaccgcctactacctgtccaagtaccacggcatcaccaatatcgcggtgctg
gagaaggggtatctgggcggcggcaacacggcgcgcaacacagcggtcatccgctccaat
tacctcaccagcgagggggtgcgcttttacgccgagtcagtacggatgtttgaagggctg
tccaatgaattcgacttcaacatcatgtattcccatcgtggccaactgacgctcgcccac
accgacgccaccgtgcgctcgttccgtcagcgtgcagaggtcaacaaacacttcggcggg
cgcaccgaaatgcttgaccgtcagcagattcgtgagctcgtgccgacactcaacctcgac
cctgggcatctcccggtgatcgcaggtctctggcacatagacggcgcaactgcccggcat
gacgcagtggcttggggttacgccaaacaggcggctaagcgtggcgtggaaatccatcag
ctcactgaagtccaagagttggtgatcgagaacggcaccatcaaggcggtgaaaaccaat
cgcggcaccatccagtgcggctgcgcggtgcaggcagtggcgggcatgagttcgcagttg
atgaagaaagcgggtatccgctcgccgatccagaccttccctctgcaagccatggtgacc
cagccgttcaagccgttcctcgacccgttggtgagctcctctgccctgcactgctacgtg
caacagaccagccgtggcgaagtggtgtttggcggtggctcggatccgtacccgctgttc
aacacccgctcaactttggacctgaaagaaagcctgctggcacacgcgatcgagatgttc
ccgttcttggccaatgccaagctgatgcgtcagtgggccgggatcaccgacatgactccg
gattacagcccgatcatggggttgtccccggtgaagaactattacctggatgccggctgg
ggcacgtggggcttcaaggctacgcccatttgcggcaagaccatggccgaactcgtcgcc
agcgggggcaaggtacctgaactgatcaagccgttcggcctcgagcgtttctcaaccttc
cagcaagtcaacgagatgggcgcgacagcggccagccactga
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