Pseudomonas poae: H045_16625
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Entry
H045_16625 CDS
T02456
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ppz
Pseudomonas poae
Pathway
ppz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H045_16625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppz03400
]
H045_16625
Enzymes [BR:
ppz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H045_16625
DNA repair and recombination proteins [BR:
ppz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H045_16625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
SH3_13
Helicase_RecD
Viral_helicase1
AAA_22
UvrD-helicase
AAA_17
SLFN-g3_helicase
AAA_16
AAA_28
T2SSE
NTPase_1
AAA_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGE27388
LinkDB
All DBs
Position
complement(3792090..3794162)
Genome browser
AA seq
690 aa
AA seq
DB search
MSLSPLPLEELAPLSRAADLLQLLDRWVERGWLRALDKAFVGFLNELDPRADPLVLLAAA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDLQTGAMLLPSQLLGGLDGAHWCQALAA
SPLVALAGDDHESAHSRPLVLAGKRLYLRRYWAYERRIDTALRLRLVTQETVSADLPQRL
NGLFEQAPPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVEAGSP
LRIRLAAPTGKAAARLTESISQQVLSLNVPQGVKDKIPTQVTTVHRLLGSRPGTRHFRHH
LGNPLPLDVLVVDEASMIDLEMMANLLDALPSHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGWYSPQTRQWLQAVSGEDLSASGLQEDLDASHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEQARALLAARSHSDLFCVSLKGEHDHALERLVLDGQGDGAQGYRYYLNLLQS
ARPPLDTLRDDPAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVKLIEG
DEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRG
GVFEEAVRRKVKRLSGLMLELGQDTEAIST
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgccgctaccgctggaggaactggcacccctgagccgcgccgccgacctg
ctgcaactgctcgaccgttgggtcgagcgcggctggctgcgtgcgctggacaaggccttc
gttggcttcctcaatgagctcgacccacgcgccgaccccctcgtgttgctggccgcggcc
ttgaccagtcaccagttgggtcacggccatgtgtgcctggacctgttcgaaaccctcaag
gcaccggatttcgccctgtcgttgccacccgaaggcgacctgcaaaccggcgccatgctg
ctgccatcacaactgctcggcggcctcgacggtgcccattggtgccaggccctggcggcc
agtcctttggtcgcattggccggcgatgaccacgagtctgcccacagccggccgttggta
ttggccggcaaacgcctgtacctgcgccgctactgggcctatgagcggcgcatcgatacc
gcgttgcgcctgcgcctggtcacgcaagaaaccgtctcggccgacttgccccagcgcttg
aatggcctgttcgagcaagccccgccggatggcgtgatcgactggcagaaactcgcctgt
gccctggccacacgcggtgcgttcagcatcgtcaccggcggccccggcactggcaagacc
accaccgtggtgcgcctgctcgcgctgttgcaggcgcccgccgtggaggccggcagcccg
ctgcgtatccgcctggccgcgcccaccggcaaggccgccgcgcgcctgaccgaatccatc
agccagcaagtgctgtcgctcaacgtgccccagggcgtgaaggacaagatcccgacccag
gtcaccaccgttcaccgcttgctcggtagtcgtcctggcactcggcactttcgtcatcac
ctgggcaacccgctgccgttggatgtgctggtggtggacgaagcctcgatgatcgacctg
gaaatgatggccaacctgctcgacgcactgccgtcccacgcgcggctggtgctgttgggt
gacaaggaccaactggcctcggtggaggccggcgccgtgctgggcgacctgtgccgcgac
gccgaggccggctggtacagcccacagacgcgccagtggctgcaagcggtcagcggcgaa
gacctcagtgccagcggcttgcaggaagacctcgacgccagccacccgctggcgcagcaa
gtggtgatgctgcgttattcgcggcgtttcggcgaaggcagcggcatcggccagctggcg
cgctgggtcaaccagcaaaacgccgaacaggcgcgtgcattgttggccgcgcgcagccac
agcgacctgttctgcgtcagcctcaagggcgagcacgaccacgctctggagcggctggtg
ctggacgggcagggcgacggcgcccaaggctatcgctactacctgaacctgctgcagtct
gcgcgcccgccgctcgacaccctacgcgacgaccccgcctggacccactgggcgcagcaa
ctgttgcaagccttcgatgcctttcagctgctatgcgccgtgcgcaagggcccgtggggt
gtggaaggcctcaacctgcgcatcaccgccgccttgcgcaaagtgaagctgatcgaaggc
gacgagcagtggtacgaaggccgtccggtcttgatgacgcgcaacgactacggccttggc
ttgatgaacggcgacattggtatcgctctgaaactgccggaaagtgacggcggcccgcag
gtattgcgcgtggccttcccacgcaacgatggccagggcggcgtacgctttgtgctgccc
agccgtctgaacgacgtggaaaccgtgtacgccatgaccgtgcacaagtcccagggctcc
gagttcacccacacggcgctgatcctgcccgatgcattgaaccctgtgctcaccaaagag
ctgatctacaccggcatcacccgcgccaaacgctggttcagcctgatcgaaccgcgtggc
ggtgtgttcgaagaagcggtgcggcgcaaggtcaagcgcctgagcggattgatgctggaa
ctgggtcaggacacggaagccatctcaacctga
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