Pseudomonas qingdaonensis: KH389_03515
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Entry
KH389_03515 CDS
T07622
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KH389_03515 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pqi02044
]
KH389_03515 (tssB)
Secretion system [BR:
pqi02044
]
Type VI secretion system
Imp/Vas secretion system core components
KH389_03515 (tssB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
QVL19664
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All DBs
Position
773791..774300
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AA seq
169 aa
AA seq
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MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTQRPDERKVEDRKPISIDKM
TFDEVLAKQELSLTLSVPNRLQDDESASDELGISLRVNSMKDFNPASLVEQVPELKKLME
LRDALVALKGPLGNAPAFRKAIEGVLADDESRTRVLGELGLSATPTTDA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggctcggtagcccccaaggaacgcatcaacgtcacgttcaaacctgcc
acgggcggcgcccaggaagaaatcgaactgcccttgaagctgctcgcgatcggtgactac
acccagcgtccggacgaacgcaaggtagaggaccgcaagcccatcagcatcgacaagatg
acgtttgacgaagtgctcgccaagcaggagttgagcctgaccctcagcgtgcccaaccgc
ttgcaggacgacgaaagcgccagcgatgagctgggcatcagcctgcgggtcaactccatg
aaggacttcaacccggccagcctggtcgagcaggtgccagagctcaagaagctgatggaa
ctgcgcgatgcgctggtggcactcaagggcccgctgggcaacgcaccggcttttcgcaag
gccatcgaaggcgtgctcgccgacgatgagtcgcgcacccgcgtactcggcgaactgggc
ctgagcgccacgccgaccaccgacgcttga
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