KEGG   Pseudomonas qingdaonensis: KH389_03590
Entry
KH389_03590       CDS       T07622                                 
Name
(GenBank) Hcp family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pqi  Pseudomonas qingdaonensis
Pathway
pqi02025  Biofilm formation - Pseudomonas aeruginosa
pqi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pqi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KH389_03590
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    KH389_03590
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pqi02044]
    KH389_03590
Secretion system [BR:pqi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KH389_03590
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: QVL19679
LinkDB
Position
792962..793480
AA seq 172 aa
MATPAYMSVTGTKQGLITAGAFTADSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPT
GQRVHKPVVITKVFDKASPLLLAALTSGERLTEIVIHWYRTSAAGTQEHYFTTKLEDAII
VDIKDYMHNCQDPANAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRTPVAG
NT seq 519 nt   +upstreamnt  +downstreamnt
atggcaacacctgcctacatgtccgtcaccggcaccaaacaaggcctgatcaccgccggt
gccttcaccgccgattcggtcggcaacacctaccaggaaggccacgaagaccaggtcatg
gtccagggcttcaaccacgaagtgatcatcccgcgcgacccgcagtccggtcagccgacc
ggccagcgcgtgcacaagccggtggtcatcaccaaggtcttcgacaaggcgtcgcccctg
ctgctggccgcgctgacctccggcgagcgcctgaccgaaatcgtcatccactggtaccgc
acctcggcggccggcacccaggagcactatttcaccaccaagctcgaagacgcgatcatc
gtcgacatcaaggactacatgcacaactgccaggacccggccaacgcgcacttcacccac
ctcgaagacgtgcacttcacctaccgcaagatcacctggacccacgaagtgtccggtacc
tccggctcggacgactggcgtaccccggtcgccggctaa

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