Podarcis raffonei (Aeolian wall lizard): 128398639
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Entry
128398639 CDS
T09310
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128398639 (SMARCE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128398639 (SMARCE1)
03036 Chromosome and associated proteins [BR:
praf03036
]
128398639 (SMARCE1)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128398639 (SMARCE1)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128398639 (SMARCE1)
PBAF complex
128398639 (SMARCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sarcoglycan_2
SPX
Motif
Other DBs
NCBI-GeneID:
128398639
NCBI-ProteinID:
XP_053215859
LinkDB
All DBs
Position
13:26018115..26045440
Genome browser
AA seq
433 aa
AA seq
DB search
MSKRPSYAPPPTPAPTTQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRATVGESTITS
SGKQQEVTRNGFRASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKI
IGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQ
RQSRMEKGEPYMSIQPAEDPDDYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVV
TTARMQVLKRQVQSLMVHQRKLEAELLQIEERHQDKKRKFLESTESFNNELKRLCSLKVE
VDMEKIAAEIAQAEEQARKRQEEREKEAAEQAERNQNSTSAEEEQAASKAEEKKEEGSTP
MEAEEPPAEETIESQQNGEGTSTPEDKESGQEGVESMAEEGTSDSNTGSESNSAMVEEPP
ADPVVPEDSEKKE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcctatgccccaccacccaccccagcccccacaacccaaatgccc
agcacaccggggtttgtgggatacaatccatacagccatctggcctacaacaactacagg
ctgggagggaacccgggcaccaacagccgggccacggtaggagaatcaactattacgtca
tccggcaaacaacaggaagtgaccagaaatggctttagagcatcatcgggtatcacaatc
cccaaaccccctaagcctccagataagccactcatgccctacatgaggtacagcaggaag
gtctgggaccaagtgaaggcgtccaatcctgacttgaagttatgggaaattgggaagatc
attggagggatgtggcgagacctcactgatgaagagaagcaagagtacttaaatgaatat
gaagcagaaaagatagagtacaacgagtcaatgaaggcctaccataactcacccgcttac
cttgcctacatcaacgcgaaaagccgcgccgaagccgccctggaggaggaaagccggcaa
aggcagtcccggatggagaaaggcgaaccttatatgagcatccagcccgccgaagaccca
gatgattatgatgacgggttttctatgaagcacactgccacagcccgtttccagagaaat
caccgcttaattagtgagattctgagtgaaagtgtcgtccccgatgtcagatccgtggtc
accacggcaaggatgcaggttctcaaacgccaagtccagtccttaatggttcaccagcgg
aaactagaagctgagctcctgcagatagaagaacgtcaccaggacaagaaaaggaagttc
ctggagagtacagaatcctttaacaatgagctgaagaggctgtgcagcctgaaggtggag
gtggacatggagaagatagcggccgaaatcgctcaggccgaggagcaggcccgcaagcgg
caggaggagagggagaaggaggccgcggagcaagccgagcgcaatcagaacagcacaagc
gccgaggaggagcaagcagccagcaaggcagaggagaagaaagaggaggggagcactccg
atggaagcagaggagcctcctgcagaagaaaccattgagagccagcaaaacggtgaaggg
acatccactccggaagacaaggagagtggccaggaaggagtcgaaagcatggcggaggaa
ggaacgagcgacagcaacaccggctccgaaagcaacagcgccatggtcgaagaaccgcca
gctgacccggtggttccggaagacagtgaaaagaaagaataa
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