KEGG   Podarcis raffonei (Aeolian wall lizard): 128410454
Entry
128410454         CDS       T09310                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03082  ATP-dependent chromatin remodeling
praf03083  Polycomb repressive complex
praf04110  Cell cycle
praf04330  Notch signaling pathway
praf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:praf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    128410454 (HDAC2)
   03083 Polycomb repressive complex
    128410454 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    128410454 (HDAC2)
   04350 TGF-beta signaling pathway
    128410454 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    128410454 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:praf03036]
    128410454 (HDAC2)
Enzymes [BR:praf01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     128410454 (HDAC2)
Chromosome and associated proteins [BR:praf03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     128410454 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     128410454 (HDAC2)
    BRAF-HDAC complex
     128410454 (HDAC2)
    REST complex
     128410454 (HDAC2)
    SHIP complex
     128410454 (HDAC2)
    MiDAC complex
     128410454 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     128410454 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    128410454 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    128410454 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 128410454
NCBI-ProteinID: XP_053237688
LinkDB
Position
3:complement(54753168..54778382)
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARLEEDKKETEDKKADIKEEDKSKDSSGEKADTKGT
KSEQLNNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagccagggaggcggcaagaagaaagtctgttactactatgacggtgatatt
gggaactattattatggacaggggcacccaatgaagcctcacaggattcgcatgacacac
aacttgttgctaaattatggcttgtacagaaaaatggaaatttatcggcctcacaaagct
acagcagaagaaatgacgaaataccacagtgatgagtacataaaatttcttcgctcaatt
agacccgacaatatgtctgaatatagtaaacaaatgcaaagatttaacgtgggggaagac
tgtcctgtgtttgatgggctgtttgagttctgtcagctgtcaactggaggctctgtggct
ggagcagtaaaattaaacagacaacaaacagacatggctgttaattgggctggaggactt
catcatgctaagaagtcagaagcatcaggtttctgctatgtcaatgatattgtgcttgcc
attctggaattactaaaataccaccaaagagtattgtacattgatattgatatccatcat
ggtgatggcgttgaagaagcattttacacaactgatcgtgtaatgacagtatcattccat
aaatatggtgaatatttccctggcacaggcgatttgagagacataggtgctggaaaaggc
aaatactatgctgtcaactttccaatgagagatggaatagatgatgagtcatatggtcag
atatttaagccaattatttccaaagtcatggagatgtaccaaccgagtgctgtggtgttg
cagtgtggggcagattcactgtctggtgacaggctgggatgttttaatcttacggtcaaa
ggacatgctaaatgtgtagaagttgtgaagactttcaacttgcctcttctgatgcttgga
ggaggtggatataccatacggaacgttgctcgatgttggacctatgagactgctgttgcc
ttagattgcgaaatccctaatgaattgccatacaatgactactttgagtattttggacca
gatttcaagctgcatattagcccttcaaatatgacaaaccagaacaccccagaatatatg
gagaagattaaacagcgtttgtttgagaacttgcgcatgttgccccatgccccaggtgta
cagatgcaggctattcctgaagatgctgttcatgaagacagtggtgatgaagatggtgaa
gatccggacaaacgtatttctattcgtgcatcagataagcgaatagcctgtgatgaagaa
ttttctgattctgaagatgaaggggaaggtggacgcagaaatgttgcagatcataagaaa
ggagcaaagaaagcccgactagaagaagacaaaaaagaaacagaagataaaaaagcagac
attaaagaggaagataaatccaaggatagcagtggtgagaaagcagataccaaaggcaca
aagtcagaacagctcaacaatccttga

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