Podarcis raffonei (Aeolian wall lizard): 128410454
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Entry
128410454 CDS
T09310
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03082
ATP-dependent chromatin remodeling
praf03083
Polycomb repressive complex
praf04110
Cell cycle
praf04330
Notch signaling pathway
praf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128410454 (HDAC2)
03083 Polycomb repressive complex
128410454 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128410454 (HDAC2)
04350 TGF-beta signaling pathway
128410454 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128410454 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128410454 (HDAC2)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128410454 (HDAC2)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
128410454 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
128410454 (HDAC2)
BRAF-HDAC complex
128410454 (HDAC2)
REST complex
128410454 (HDAC2)
SHIP complex
128410454 (HDAC2)
MiDAC complex
128410454 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
128410454 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128410454 (HDAC2)
Chromatin remodeling factors
NuRD complex
128410454 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
128410454
NCBI-ProteinID:
XP_053237688
LinkDB
All DBs
Position
3:complement(54753168..54778382)
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARLEEDKKETEDKKADIKEEDKSKDSSGEKADTKGT
KSEQLNNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagccagggaggcggcaagaagaaagtctgttactactatgacggtgatatt
gggaactattattatggacaggggcacccaatgaagcctcacaggattcgcatgacacac
aacttgttgctaaattatggcttgtacagaaaaatggaaatttatcggcctcacaaagct
acagcagaagaaatgacgaaataccacagtgatgagtacataaaatttcttcgctcaatt
agacccgacaatatgtctgaatatagtaaacaaatgcaaagatttaacgtgggggaagac
tgtcctgtgtttgatgggctgtttgagttctgtcagctgtcaactggaggctctgtggct
ggagcagtaaaattaaacagacaacaaacagacatggctgttaattgggctggaggactt
catcatgctaagaagtcagaagcatcaggtttctgctatgtcaatgatattgtgcttgcc
attctggaattactaaaataccaccaaagagtattgtacattgatattgatatccatcat
ggtgatggcgttgaagaagcattttacacaactgatcgtgtaatgacagtatcattccat
aaatatggtgaatatttccctggcacaggcgatttgagagacataggtgctggaaaaggc
aaatactatgctgtcaactttccaatgagagatggaatagatgatgagtcatatggtcag
atatttaagccaattatttccaaagtcatggagatgtaccaaccgagtgctgtggtgttg
cagtgtggggcagattcactgtctggtgacaggctgggatgttttaatcttacggtcaaa
ggacatgctaaatgtgtagaagttgtgaagactttcaacttgcctcttctgatgcttgga
ggaggtggatataccatacggaacgttgctcgatgttggacctatgagactgctgttgcc
ttagattgcgaaatccctaatgaattgccatacaatgactactttgagtattttggacca
gatttcaagctgcatattagcccttcaaatatgacaaaccagaacaccccagaatatatg
gagaagattaaacagcgtttgtttgagaacttgcgcatgttgccccatgccccaggtgta
cagatgcaggctattcctgaagatgctgttcatgaagacagtggtgatgaagatggtgaa
gatccggacaaacgtatttctattcgtgcatcagataagcgaatagcctgtgatgaagaa
ttttctgattctgaagatgaaggggaaggtggacgcagaaatgttgcagatcataagaaa
ggagcaaagaaagcccgactagaagaagacaaaaaagaaacagaagataaaaaagcagac
attaaagaggaagataaatccaaggatagcagtggtgagaaagcagataccaaaggcaca
aagtcagaacagctcaacaatccttga
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