Podarcis raffonei (Aeolian wall lizard): 128420203
Help
Entry
128420203 CDS
T09310
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03022
Basal transcription factors
praf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128420203 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
128420203 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128420203 (ERCC2)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128420203 (ERCC2)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128420203 (ERCC2)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128420203 (ERCC2)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128420203 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
Motif
Other DBs
NCBI-GeneID:
128420203
NCBI-ProteinID:
XP_053257720
LinkDB
All DBs
Position
8:3891808..3922466
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAHPLEVTKLIYCSRTVPEIEKVIEELRKLLDFHEKQTGDKLPFLGLALSSRKNLCIHPE
VSAFRFGKEVDGKCFSLTASYVRAQQQQDSSVPSCRFFEEFDAHGRQVPLPYGVYNLDDL
KAFGRQKGWCPYFLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMGVNITRKMLDRCQGNVATLQASIQKIKETDAQKLKEEYRRLVEGLREANVARE
TDVYLANPVLPDEVLQEAVPGNIRTAEHFVGFLKRFLEYLKSRLRVHHVVQESPPSFLKD
IFEKVCIERKPLRFCAERLRSLLRTLEIADISDFSPITLISNFATLVSTYSKGFTIIIEP
FDDRTPTITNPILHFSCMDASIAIKPVFERFQSVIITSGTLSPLDIYPKILDFRPVTMAT
FTMTLARTCLCPMIVGRGNDQVTISSKFETREDIAVIRNYGNLLLEMSAIVPDGIVAFFT
SYQYMENIVASWYEQGILENIQRNKLIFIETQDGAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVQHYGRAVIMFGVPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHITDANLNLTVDEAVQVSKFF
LRQMAQPFRKEDQLGLSLLTFEQLQSEETLRRVQEIAHQV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaacatagatggactgcttgtttatttcccctatgattacatctacccggag
cagtattcttacatgctggagctgaagaggacattggatgccaagggtcatggcgttctg
gaaatgccatcgggcaccgggaagacaatctccctcctgtctctgattgtggcctaccag
cgggctcatcccctggaagtgaccaagctcatttactgctcccgaacggtgccagagatt
gaaaaggtcattgaggaactgcgcaaactcctggatttccacgagaagcagacaggagac
aagctgcccttcctgggcttggcgctcagctccaggaagaacctctgcatccacccggag
gtgagcgcctttcgcttcggcaaggaggtggacgggaaatgcttcagcctgactgcttcc
tatgttcgggctcagcagcagcaggacagcagcgtcccctcttgccgcttctttgaggaa
tttgatgcgcacgggcggcaggtgcctctcccatacggcgtgtacaatcttgacgacttg
aaggcctttggtcgccagaaaggatggtgcccctacttccttgcacgatactcgatcctt
cacgccaacatcgtggtgtacagctaccactatcttctggaccccaagatcgctgacctg
gtgtctaaagaactggccaagaaatccgtcgtcgtcttcgacgaggctcacaatatcgac
aacgtctgcattgattccatgggggtcaacatcacgcgcaagatgctagaccggtgccag
gggaacgtggccacgctccaagccagcatacagaagatcaaggagacggatgctcagaag
ctgaaggaggaataccggcgcctggtggaaggtctgcgggaggcgaatgtcgcccgcgaa
acggacgtctatttggccaacccggtgctgcccgacgaggtcctgcaagaggccgtcccg
ggcaacatccggaccgcggagcactttgtgggcttcctgaaacgcttcctggagtacttg
aagtcccgcttgcgggtgcatcacgtggtccaggaaagccccccgtctttcctgaaggac
atcttcgagaaggtctgcattgagcgcaagccccttcgattctgtgcagagcgactccgc
tcccttcttcgaacactggaaatcgccgacatctccgatttctcccccatcacgctgatt
tccaatttcgccaccctggtcagcacttactccaaaggttttactataatcatcgaaccg
tttgatgaccgaacacccactatcaccaatcccatcctgcacttcagctgcatggacgcc
tccatcgctatcaagccggtctttgagaggttccagtcggtcattatcacctcaggaacc
ctttcaccgctggacatctaccccaaaatcctggacttcaggcccgtcaccatggcaacg
ttcaccatgaccctcgccaggacctgcctttgcccgatgattgtggggagagggaacgac
caggtgaccatcagctccaagttcgagacgcgcgaagacattgccgtaatccgcaactac
gggaatctgctgctggagatgtcagccatcgtcccggacggcatcgtggcctttttcacc
agctaccagtacatggagaacattgtggcctcgtggtatgagcaggggatcctagagaac
atccagcgcaacaaactcatcttcatcgagacgcaggacggagcagagacgagcatggcc
cttgagaagtaccaggaggcctgcgaaaacggacggggagccattttgctgtctgtggcc
agggggaaggtctctgaagggatcgactttgtccaacactacgggagagctgtgatcatg
tttggcgtgccctacgtctacacccagagccgaatcctgaaggcccgtctagactacctg
cgggaccagttccagatccgcgaaaacgacttcctgaccttcgacgccatgcgccacgca
gcccagtgcgtggggagagccattcgcggcaagaccgactacggcctgatggtgttcgct
gacaagcgcttcgcgcgggcggacaaacggggcaagctcccccgctggatccaggagcac
atcacggacgccaacctcaacttgacggtggatgaggccgtgcaggtgtcaaagttcttc
ttgcgccaaatggcccagccgttccgcaaggaggaccagctgggtctgtctctcctcacc
ttcgagcagctgcagtcggaggagacgctacgcagggtgcaggaaattgcccaccaggtg
tga
DBGET
integrated database retrieval system
