Limnobaculum zhutongyuii: EKN56_18835
Help
Entry
EKN56_18835 CDS
T06157
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
prag
Limnobaculum zhutongyuii
Pathway
prag00550
Peptidoglycan biosynthesis
prag01100
Metabolic pathways
prag01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
prag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EKN56_18835
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EKN56_18835
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
prag01003
]
EKN56_18835
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prag01011
]
EKN56_18835
Enzymes [BR:
prag01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
EKN56_18835
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EKN56_18835
Glycosyltransferases [BR:
prag01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
EKN56_18835
Peptidoglycan biosynthesis and degradation proteins [BR:
prag01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
EKN56_18835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PCB_OB
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QBH98264
UniProt:
A0A411WPS6
LinkDB
All DBs
Position
4205144..4207762
Genome browser
AA seq
872 aa
AA seq
DB search
MKFVKYLFIIAICCFFLGIGAIFGLYKYLEPELPDVSTLKEVKLQMPMQVFSAEGELIAQ
FGEMRRIPVTLKQMPPQLIHAFLATEDSRFYEHHGLDPIGIARALVVAVGAGSAQQGAST
ITQQLARNFFLSPEKTITRKAKEAFLAIRIERSLTKDEILELYLNKIYLGSRAYGIGAAA
HVYFGKDVSQLTLSEMAMIAGLPKAPSSYNPINYPDRALVRRHTVLYRMLEEKYITQQEY
MEAKNSPLVANYHEPEVAFTASYLAEMVRQEMIDRFGENAYTDGYKVYTTVTKSLQTAAT
DAVRNNIIDYDMRHGYRGPEHVLWKGAETPWEKQQIVDFLKGVSSYGPLIPAVVTKTEGQ
QATLMLHDGEALTLPFSAMRWARPFINDRAMGASPRKVTDVVKAGQQIWIRKSGENWVLS
QIPGVNSALISLDPHDGAIKALVGGFDFNQSKFNRVTQSVRQAGSNIKPFVYAAALDKGM
TLSTLLTDLPITLNVGGGKTWSPKNSPPTYAGPLRLRVGLGLSKNVMIVRAMRAIGVDYA
ADYLQRFGFPEQNISRTESLALGAASFTPLQLARGYAVFANGGYLVDPYFIAKIEDDTGA
VIFGAKPKVACGFTCDIPVIYGATAKSQALVSNTVDLRSPEDAAATAAALAAAATANPEP
ADPADDSSDDVDPLTENAVNNIAPVPNLAKIDPSKVPPADPYAPHVISSELAFLVQDALK
SDISGEPGGGWNGTGWRAARDLKRNDIGGKTGTTNSSKDAWFSGFGPSTVTSVWIGFDDH
RRGLGRGEAGAQSAQPAWINFMKVALNGLPVQTTPQPKGIISVTIDMSTGQLPGGGRSRS
EYFIKGTEPTARAYSEVGTTVTDSGGNTHELF
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcgtaaagtatttgttcatcattgcaatttgttgcttttttttgggaattggc
gcgatttttggcctctataaataccttgaaccggaactaccggatgtttcaacgttaaaa
gaagtcaaactacagatgcctatgcaggtatttagcgcagagggagagcttattgctcaa
tttggtgaaatgcgccgcattccggtgacgctaaaacaaatgccgcctcagttaattcat
gcatttctggcaacagaagatagccgtttctatgagcaccacggtcttgaccctattggt
attgcccgtgcgttagtcgttgccgttggtgctggttctgcccagcaaggggccagtacc
atcactcaacagctggcaagaaacttcttccttagccctgagaaaaccattactcgtaag
gcaaaagaggcttttctggccattcgtattgaaagatcgttgaccaaagatgagattctt
gagctctatctaaacaaaatttatctgggttcacgggcttatggtattggcgccgctgcg
cacgtctatttcggtaaagatgtcagccaactgacgttaagcgaaatggcgatgatcgcc
ggtctgccaaaagcaccatccagctacaacccgatcaactatcctgaccgggcactggta
cgtcgtcataccgtgctttatcgtatgttggaagagaaatacattactcagcaagagtac
atggaagctaaaaactcaccgttggtcgctaactaccatgaaccagaggtggcgtttacc
gcatcttatctggcggaaatggtacgtcaggaaatgattgatagatttggtgaaaatgct
tataccgatggttacaaggtttacaccacggtgaccaaatccttgcaaacagcagcaacc
gacgcggtgcgcaacaatatcattgattatgatatgcgccatggttaccgtggtcctgag
catgtgctgtggaaaggggctgaaaccccgtgggaaaaacagcagattgttgatttcctg
aaaggcgtttccagctacggccctcttattcctgctgtagtgacaaaaacggaaggccaa
caggccaccctaatgcttcacgatggcgaagctctgacgttaccgttctcggccatgcgc
tgggccagaccgtttattaacgatcgggcaatgggcgccagcccaagaaaagtgaccgat
gtggttaaagccggtcagcaaatttggatccgtaagagcggtgagaactgggtattatca
caaatccctggcgttaactctgcgttaatctcattagatccacacgatggtgccatcaaa
gcattagtgggtggatttgattttaaccaaagtaaatttaaccgggtcactcagtccgtt
cgtcaagccgggtctaatatcaagccattcgtttatgccgcggcattggataaagggatg
accctttctacattgttaaccgacttgccgattacgctaaacgttggtggtggtaaaacc
tggtcacctaaaaactcaccgcctacgtatgccggccctctgcgtttacgggttggttta
ggtttatccaaaaacgtaatgatcgttcgcgcaatgcgtgctattggcgtggattatgct
gctgattatctgcaacgttttggattcccggaacaaaacatttcgcgaactgagtcatta
gcgctgggagcggcgtcatttaccccgctgcaattagcgcgtggttatgcggtattcgcc
aacggtggctatttagttgacccttatttcatcgccaaaattgaagatgatactggtgcc
gttatctttggtgctaaacctaaggtggcctgtggctttacctgcgatattccggtgatt
tatggcgcaacggcaaaatctcaggcgctggttagtaacaccgttgacctgcgcagtccg
gaagatgccgcagcaactgcagcggctcttgctgcggcagctacggccaatccagaacct
gcagatcctgctgatgatagttcagacgatgtcgatccattaactgagaatgcagttaac
aatatcgcaccagtaccaaatctggcgaaaattgatccatctaaggttccaccggcagat
ccttatgcccctcacgttatcagctctgagttagccttcctggtacaggatgcattgaag
agtgatatctctggagaaccaggtggtggttggaacggtaccggttggcgtgcggcaagg
gatctaaaacgtaatgatatcggtggtaaaaccggtaccactaacagttcaaaagatgcc
tggttctctggttttggcccatccaccgtgacgtccgtctggattggctttgacgatcac
cgccgtggattaggtcgtggtgaagcgggtgcgcagagtgctcagccagcctggattaac
ttcatgaaggttgcgctaaatggcttaccggtacagactacaccacaaccaaaaggcatt
atcagcgtgactatcgatatgtcgacaggacaacttcctggtggtggccgtagccgttca
gaatactttattaaaggtactgaaccgaccgctcgagcttactctgaagttggtacaacg
gtaaccgacagcggtggtaacacccatgaactgttctga
DBGET
integrated database retrieval system
