Pieris rapae (cabbage white): 110999955
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Entry
110999955 CDS
T05162
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110999955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prap03036
]
110999955
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
110999955
REST complex
110999955
Heterochromatin formation proteins
Other heterochromatin formation proteins
110999955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Sin3a_C
Bee_toxin
Motif
Other DBs
NCBI-GeneID:
110999955
NCBI-ProteinID:
XP_045487440
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All DBs
Position
15:complement(8658375..8683845)
Genome browser
AA seq
1367 aa
AA seq
DB search
MMKRTGPRLGPDEPTPMSQSPAQIQQAGASNMHTLAQSAQPQMLGATTMLSVSNAFNRGP
PRAAGPQVINYLKANTVQYAPPPKQQPQVPPRLKLVTQPATLSMGGRQSPGVGGVPGAPA
GASFQRLKVEDALSYLDQVKYRFNTQPQVYNDFLDIMKEFKSQTSRYSIDTPGVITRVSN
LFKGHPELIVGFNTFLPPGYKIEVQSNGQVSVSMPSPTGVGVLPPVPGANVTNVPTGPHT
PHGPVPSSGQVLLGVHHAPAQPQLVHILPVQQSVSQVVHNLSVAPSAANTLHHISQAHQQ
IEAAAIHHTSGGATNTSVHSAAGQQPVEFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAY
QRGHRDVKEPQAKQQTEQEVYSQVAKLFENQEDLLAEFGQFLPDAKAVTKPPHCPPHNRT
PPPPSRVEPEPERFTSAAAASPPLAQHTIHHQQVPKHTSTSNVAAAPPQHHHLKRSPSFS
SSTPLASGAPPAKKPRASVPGATPSTPPTSLRDVSYAEAAKLATAHEYNFFDRARKALRS
QQVYENFLRCILLFTNEIISSSELICVVSPFLCRHPELQKWLQDFLGPISPPHTPTAPSS
GYNNTSGTSTLLGYERSRLGSESKARVEPLVPIHTALPLTATLRHDRPPTDNNMELDLST
CKRLGTSYCALPREAAARRCSGRTALCKEVLNDTWVSIPTWSEDSTFVTSRKTQYEEYIY
RCEDERFELDVVIETNAATIRVLEGVQKKLSRMTSEEAAKYRLDDCLGGHSPTIHQRALK
RIYGDKVAVDIIAGLKKNPVVAVPVVLRRLKAKEEEWREAQKGFNKQWREQNEKYYLKSL
DHQGINFKQNDLKAMRSKSLFNEVESVYATRRPGPHYIADYNMANRQEAIKIVRDAAELL
IHHARRQTAIQKAEKRRIKQLLRQFLPDLFAHPRQPLSDDERDDEEKEEATSPGSPGQHD
EKITKQEKQESSESDNASEKSTRHNKIDKENKPKNNNNTETKDCLIKRGICNEETVKDIK
NEMDIDDFRDYPPNEGRFVCTSSWYLFLRLHAILCSRLSGARRAALALAEAEAVGANARP
PSVAAALRLKPHNLPSEVSSPAEYYNTLLELVKGVLDGNTEASAYEDAAREMFGIKAYPA
YTLDKVVSTAVRQLQHCVSESWSVRAAELAARGGMRGPLSYVYKAAKYLRPEHTTFLVKV
YGGDECKVTFELLEPAGEGRTSPQLNNDGSRLSPTNQCGRENGPSSVTAAAAWSRYTERF
ARPDTSARYHKPVFLRRNARKNGGGELIATSSTGLRHQPPTVRRRKPLRLHDHSECTISN
PIRFVACRPHQLYRAGCLSSARASQQRLSATRRERFRAWLASTQRPT
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgcacgggacccaggcttgggccagatgagcctacacctatgtcgcagagt
cctgctcagattcagcaggctggtgcaagcaatatgcatactttagcacaatcagcgcaa
cctcagatgttaggtgcaacaacaatgctatcagtaagcaacgcgtttaatcgtggtccg
ccaagagcagcgggcccccaagtgatcaactatttgaaagcgaacactgtgcaatacgca
ccaccgcccaaacaacaaccgcaagttccgcccaggctcaagctggtaacccaacccgca
actttgagcatgggcgggcgccagtcccctggcgtgggcggcgtgccgggagctccagcg
ggtgctagcttccaacgcctgaaggtagaggacgctttgtcgtatctcgaccaagtgaaa
tacaggtttaacactcagccgcaggtctacaacgactttttggacattatgaaggagttt
aagagccagacttctcgttacagtatagacacaccaggggttattacccgggtatcgaac
ctgttcaagggacacccagagctgattgtcgggtttaacacatttctgccaccgggttac
aagattgaggtgcagagtaatggccaggtttcggtgtctatgccttctcccacgggcgtg
ggagtcttgccaccagtcccaggggctaacgttacgaatgtcccaaccgggcctcacaca
ccccatggcccagtgcccagttccgggcaagtgttattgggagtacaccatgcaccggcg
cagcctcagctagttcatatattaccagtgcaacagtcggtgagccaagtggtgcataat
ctgtctgtggcaccgagtgctgcgaacacattgcaccatatatctcaagctcatcaacag
attgaggcagctgctattcatcatacaagtggtggtgctacaaacacgagcgtacactcg
gccgccggacaacaacctgtggagttcaaccacgctatcgaatatgttaataaaattaag
tcccgtttctcccgtcaaccggacaaatacaaacgattcctggagatactccatgcttat
cagcgaggtcatcgcgacgtgaaagagccccaggccaaacagcagactgagcaagaagtt
tattcccaggttgcaaaattgttcgagaaccaagaagacctgttggcggagttcgggcag
ttcctgcctgacgccaaagccgtcacgaagccgcctcattgccccccgcataataggaca
ccgccgccaccctctcgagtggaacccgaacctgagagattcacaagtgccgcggctgca
tcgccaccacttgcgcaacatacaatacaccatcaacaggttcccaaacataccagcaca
agtaatgtggcagctgcaccccctcagcatcatcatctcaagagatcaccgagcttctca
tcatctactccacttgcttccggagccccgccagccaagaaaccccgggcttcggtacct
ggggctacgccctcaactccccctacgagccttcgcgatgtctcctacgcagaggcagct
aaactggcaactgcgcacgagtataacttcttcgatcgcgcgagaaaggccctcaggtcg
cagcaagtgtatgagaattttttgaggtgcatccttctcttcacaaacgagattatatca
tcatcggagttgatctgtgtggtttctccattcctctgccgccatcctgagttacagaaa
tggctacaggacttcctcggacccatttcaccgccccataccccaacggcgcctagttca
gggtacaacaatacaagcggtacatcaactctcctaggttacgagaggtcccgtctgggc
tccgaaagcaaagcccgagtggagccactcgtgcctatacacaccgctttgccactcaca
gctacattacgccatgatcgacctcctaccgataataatatggagcttgatctatctaca
tgtaaacggctgggtacatcctattgcgctctgccaagagaggccgcagctaggcgatgc
tctggaaggacggccttatgtaaagaggtgttaaatgatacttgggtatcaattcctact
tggagtgaagattcaacgtttgtcacatctcgaaagacccaatatgaagagtatatctat
agatgtgaagatgagaggtttgagctggatgtggtgatagaaacgaacgcggccaccata
cgtgtcctggagggtgttcagaaaaagttgtcccgcatgacgtccgaagaagccgccaag
taccgcctggacgactgcctgggaggccactcgccgaccatccaccagagggcgctgaag
cggatttacggtgataaggtggcggtggacataattgccggtttgaagaaaaacccagtt
gtggccgtaccagttgtattgagacggctcaaagccaaggaggaggaatggagagaggcg
caaaagggcttcaacaagcaatggcgggaacaaaacgagaaatattatctcaaatcgctc
gatcatcaagggatcaatttcaaacagaacgatttaaaggccatgagatcgaaatccctc
tttaacgaagtggagagcgtgtacgcgacgagaagacccgggccgcattatatagccgat
tataacatggctaatagacaagaagctataaaaatagtccgtgacgccgctgagctgcta
atccaccacgccagaaggcagacggcgatacagaaggcggaaaagcgacgcatcaagcaa
ctcttgagacagtttctgcccgatttgtttgctcatccgaggcaaccactgtcagatgac
gagagagatgatgaagaaaaagaagaagccacaagtcctggcagccctgggcaacatgat
gagaagattacaaaacaggagaaacaagagtcatcagaatctgacaacgcgtccgaaaag
agtacgaggcataataagattgataaggaaaataaacccaagaacaacaataatacagaa
acaaaagattgtctcataaaacgtggcatttgcaatgaagagactgtcaaagatataaaa
aatgaaatggacatcgatgacttcagagattatccacccaatgagggccgtttcgtatgc
acatcgtcgtggtacctgttccttcggctccacgccatcttgtgttctcgcttgtccggg
gcccgacgagctgccctcgccttggcagaggctgaggcggtgggagccaacgcacgacct
cccagcgtagcggctgcgctacgactgaaaccgcacaacttaccatccgaggtgtcatcc
ccagcggagtattacaacacattactagaactggtaaagggtgtgttagatggcaacact
gaggcatccgcgtacgaggacgcggcgagggaaatgtttggcatcaaggcctatcctgcc
tatacactggataaagtggtttcaactgctgttagacagctccaacattgcgtatcagag
agttggtcagttcgtgctgcagaactggcagcgcgaggaggaatgcgaggacctctctcc
tacgtctataaggctgctaaatatctacgaccggaacatacaaccttccttgttaaagtg
tatggcggcgacgagtgtaaagtgactttcgagttgttagagccggcgggtgaagggaga
acgtcaccgcagctgaataacgacggaagtcgactgtcacccactaatcagtgcggtcgc
gaaaacggcccatcctctgtaacggcggcggctgcctggtcccgatacacggagcgcttc
gctcgccccgacacgtccgcccgctaccacaagcccgtgtttctgaggcgaaacgcccgg
aagaacggcggtggggagctcatcgccacctccagtacggggctccggcatcagccgccc
accgttaggcggaggaagccgttgcgccttcacgaccactcggagtgtactatttctaat
cctatacgtttcgtcgcgtgtcgtcctcatcagttgtatcgcgcgggatgtctgtcgagc
gctcgggcgtcccaacagcgtctctcggcgacgagaagagaaaggttcagagcctggctt
gcctccacgcagagacccacttaa
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