Pieris rapae (cabbage white): 111003296
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Entry
111003296 CDS
T05162
Name
(RefSeq) ATP-dependent RNA helicase DHX30 isoform X1
KO
K13185
ATP-dependent RNA helicase DHX30 [EC:
5.6.2.6
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
111003296
03029 Mitochondrial biogenesis [BR:
prap03029
]
111003296
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111003296
Spliceosome [BR:
prap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111003296
Mitochondrial biogenesis [BR:
prap03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
111003296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_19
AAA_30
HA2_N
nSTAND1
AAA_22
ABC_tran
nSTAND3
HMG_box
Motif
Other DBs
NCBI-GeneID:
111003296
NCBI-ProteinID:
XP_022129416
LinkDB
All DBs
Position
18:7828819..7853939
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AA seq
1068 aa
AA seq
DB search
MFPKSLLLPRIRICRSLNSVGYICNNLNITGGINNYHSLTCHNLKSTFTLNQRLPTFSYL
LHLKCYSHVDDKIHEENTQREKELNNIRQLFTQPRVILNELTAKTPEKIFEIHYKQANVA
PKGSKKKPSQNDWTCAYSFVWPEKIKFEGTSISKRQAAEKAAIQALHWLYINKRIDKKGN
PIYDTNVLQTLKSTINSPIQGSISERSIEKIEKIWNEYESEIKTIYDATFKEAKQRHYNF
PVRVQKDSTIDEDDGIVGSEEEDKTLDFRTTIHPVFGKLIEAPSSATLARRERHLERIFK
HYEDSLTPLPIDQYAEEITSKLETSRVAVIVGAAGCGKSTRVPAAILRNCGFGTTAIVSE
PRRVAAIGLAQRVADELGENVGETVGYQVRLQSKPPRPPAGAILFCTSGVLLRRLQFNPG
LEGCTHVIIDEAHERDVNTDITLLLLKRALKINPKLKIVVMSATLDIGVFTRYFEDCPLI
EVPGRTFPVKDFYLDDVEKQFNIKLKNTRENCTKEDGKPLINCQEVVEVIKAVDNTKTEG
AILVFLPGWAEIKKSKELLDQIYNDGTHLILPVHSRLSTADQTKMFNKPPPGVRKIVLST
NIAETSVTIPDVVHVIDTGAHKENRVKQGTGTASLETVWVSKAGSKQRAGRAGRVQSGFC
YKLYSKEKEADFTPHTTPEILRIPLDQTVLDCKTYAPEEKVEDFLSQLPQPPSKDSLRFA
VNDLIDLGALSKTEQLTRLGILVSHLNISPRLARGVLHSAIVGNVVAAGNLVAHCSDNVE
VFANAADRKDEIRNIKRKFSLTSDHTALHWIQDSFEQKLEEVGWREVDGWCDMYGLRKDR
LAYVKSLSNLHLENLLKCGMLEKNPEVEDLNRYSNIDEMTSAILLSGSNTILFTKKMVKT
KGKLKTAVELFTSVGERAHIGGESINYGITKRKQNINLLTYFGGYHSIERRALVVHKTTL
ISPLTALLFSMGDVQKKVSVEDTTDLYLPRHRLTIEVPTSQADHILRLREMLWNTFEYYI
ERNVNGISFEEFTKTSAFKNILMKTVARVLVEANSEYVEKFIKNTDFR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaaaaagtttattattacctagaataaggatatgcagaagcttaaacagtgta
ggatatatatgtaacaatttaaatataacaggtggaataaataactatcacagtcttaca
tgtcataacttaaagtcaacatttactttgaatcaaagactaccaacattttcctattta
ctgcatttgaaatgttattcccatgttgatgataaaattcatgaagaaaatacccaaagg
gaaaaagagttaaataatatacgtcagctatttacacagcctagagtaatattaaatgaa
ttaactgctaagacaccagagaaaatatttgaaatacattataagcaagctaatgttgca
ccaaaaggatcgaaaaagaagccatcgcagaatgactggacctgtgcttattcttttgtg
tggccggaaaagataaagtttgaaggaacatcaatatcaaaacgacaagctgcagaaaag
gcagccattcaagctcttcattggttgtatataaataaacggatagacaaaaaaggcaac
ccaatatatgatacaaatgtgttgcaaactttgaagagcactatcaatagtcctatacaa
gggtcgataagtgagaggtctattgagaaaattgaaaaaatatggaatgaatatgagagt
gaaattaaaacaatatatgatgcaacgtttaaagaggctaaacagcgacattacaatttc
cctgttagagtgcagaaagactccacgattgatgaagacgacggtattgtaggaagtgaa
gaagaggacaaaacattagatttccgaaccaccatacacccagtgtttggaaaattaata
gaagcgccatctagtgcaactctggcgaggcgagaacgacacttggaaaggatttttaaa
cattatgaagactccttgactcctctgcctattgatcaatatgcagaggaaataacatct
aaactagaaacttctcgtgtggcggtgatcgtaggcgcggctgggtgtggtaaatcaact
agggttccggcagccattttgagaaactgcggttttggaactaccgcaattgtgtcagaa
ccccgaagagtagcggctattggactagcacagagagtcgctgatgagttaggggaaaat
gttggtgaaacagtgggataccaggttcgacttcaatcaaaacccccgaggccgccagct
ggcgccatcttgttttgcacttctggtgtacttttgcgcaggttacaattcaatccagga
ctcgaaggatgtactcatgtgataatagacgaggctcacgaacgggacgttaacacagac
atcaccttgcttttattgaaacgcgcactcaagatcaatcctaagcttaagattgttgtc
atgagcgctacattggatattggagtatttacaagatatttcgaggattgcccgttaata
gaagttccaggtcgaacttttccagttaaagatttttatttagatgatgtagagaaacaa
tttaatattaaactgaagaatacaagagaaaattgcactaaagaggatggcaagccgctg
atcaattgtcaagaggttgtagaagtcataaaagcagttgataatacaaagacggaaggc
gcaatactagtctttctcccgggttgggctgaaattaaaaagagcaaagaactattggac
cagatctataatgatgggacgcatcttatattgcccgtgcattcgagattgtcaacggca
gatcaaacaaaaatgttcaataaaccaccgccaggcgttagaaagatagttctctccaca
aacatagcggaaacatcggtcaccattcccgatgtcgttcacgtgattgatacgggcgca
cacaaagaaaacagagttaaacagggcaccgggacagcaagcttggaaacagtatgggta
tccaaagcgggttcaaaacaacgcgcagggagggcgggacgagttcagtcaggcttttgc
tacaaactgtattcaaaagagaaggaggctgatttcacaccgcatacgactccagaaata
ttgaggataccattagaccaaacagtgttggattgtaagacctacgcaccggaagagaaa
gtggaagatttcctctcacaacttccacagcctccgagcaaggattcattgcgattcgct
gtcaatgacctcatagacttaggggctctatcaaagacagagcaactgacccgtctaggg
atactggtgtcccatctgaacatatctccccgtctggccaggggcgtattgcattcggcg
attgttgggaatgttgtcgctgcggggaatttggtcgctcattgctctgataacgtcgaa
gtatttgcgaatgcggcggacaggaaggatgagattcgaaacataaagcgaaaatttagt
ttgacgtccgatcatacggccttacactggattcaggactcgttcgagcaaaagttggag
gaagttggatggagggaggtggatggatggtgcgacatgtacggtttgaggaaggaccgg
ctggcgtatgttaaatcattgtcaaacctgcacttggagaacttactgaaatgtggaatg
ttagagaaaaatccagaagttgaagatctgaatagatattcgaatatagacgagatgacg
tcagcgatattattatccggatctaatacaatacttttcacaaagaaaatggtgaaaact
aaagggaaattgaagacagcggtggaattgtttacgagtgtaggcgaacgtgcccatata
ggaggcgaaagtattaactacggaataactaaacgcaaacaaaatatcaatttactgact
tattttggtggatatcattcgattgaacgtcgagcgttggtcgttcataagacgacttta
atatcacccttgaccgctctacttttctctatgggagacgtgcagaagaaagtcagcgta
gaagacacaacagatttgtatttgccaagacacagactaacaatcgaagtgccgacaagc
caagccgaccacatactacgtttaagagaaatgttatggaacactttcgaatactacatt
gaaagaaatgtcaacggaatttccttcgaggagttcacgaagacgtcggcgtttaaaaac
attctcatgaagactgtagctcgtgttttagttgaagcgaatagtgaatatgttgagaaa
ttcatcaagaatactgattttagataa
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