Pieris rapae (cabbage white): 111003997
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Entry
111003997 CDS
T05162
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111003997
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111003997
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111003997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
HA2_N
AAA_19
AAA_22
Herpes_ori_bp
AAA_14
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
111003997
NCBI-ProteinID:
XP_022130487
LinkDB
All DBs
Position
5:complement(5822812..5842042)
Genome browser
AA seq
1149 aa
AA seq
DB search
MSKLSDSRYKRRRSESCEREALEYSKRRRSPRNSPTRASLSYPECFSFLNYKRNLNKIIL
YNNDTNTVANSIDDFWVFVKKYEATLRKVHKPLLSYESEEKKVNDLGISETFSKGDCINF
TSKIKFMDSVYDEGDKNRLNEKKFKVFLNIISIYIDFKNKEKFEKLKKLRKAQRDLPVAK
FRSDIVKAVQNEKVVVVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACISLSKRVAY
EMLAQYETKVGYQIRFEKSKTADTSICFITEGLLLRQMSSENLPNYDVIILDEIHERHLM
GDFLLGVLKCLIHTRTDIKLVLMSATINIKLFEDYFSAESAVVIQVPGRLFPIQLHYKPI
LIEDKPTRDDRLDPQPYVQIMHMIDNKFPSDERGDLLIFMSGVQEITSICDAAQQYAEKN
KNWIVLPLHSGLSLVEQDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMS
YDSSTKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYAEQQYTDMDAFSTPEVSRVPL
ASLLLLMSSLGVNDVRRFPFIDTPPEDAIENALLELKQHGALTSNEKLTPLGKALANLPV
EVSLAKALVIGSATLPPNKLDSALALTAALGIRSIFTTRAHRDFECENSRKPDESDHGDP
ITLVSLYCAWLKEKCKGGGRAWCRRRGIEEQRLYELTKLAAQLKALLQDNNLMEAPETES
MTSTERAMRHGQMKQLKDMRRQYKQKAAEDSKKRKRLKVDSWEIVDDKDDNSIDIRDIEF
RLSNDANRIQSLINGSSTSSGRDLAMLKIVLCRALYPQIAVADEFNHCKSVSEQLYHTWS
KPFVFLHPTSYFGKQGRVLQLVEEDIQTDILGFKSKLPVSSRHQILCYLSLLETTKPYIV
NSMRMPAAQTLLLLAHTIDTNFGFSRIICDSWLLLEFPYPDTGLKLLYKATKLRQRWDAL
INRRLLDANPNKSVESELEKNKPRLSYDEIQYELSKDFSSYLNSDVCYTIKRLLPADLKA
LYNCEEQANVDPNPFDLEFKCRPHDKKGGVYITDNVVFNCVVDSDWSYNSYQETYSIPWN
CPNCGITVCLSPLERLQHTEFTCSVKEEKEIKPIVKQNKPNGTEYKCENCKEILYMTPVE
ILRHKKSCR
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattaagtgactcaagatataaacgtagaagatcagaatcttgtgaaagagaa
gcccttgaatatagtaaaagaagaagatcacctcgaaatagtccaacaagagcttctcta
agttaccctgaatgttttagttttttaaactataagcgaaacttgaataaaataattcta
tacaataatgatacaaacacagttgcaaatagtattgatgatttttgggtatttgtcaaa
aaatatgaagccactctaagaaaagttcacaaaccacttctatcttatgaatctgaagaa
aaaaaagtaaatgatttgggaatatcagaaactttttcaaaaggtgattgtattaacttt
acatcgaaaataaaatttatggattccgtttatgatgaaggagataagaacagacttaat
gaaaaaaagtttaaggtttttctcaatataatttcaatttacattgattttaaaaataag
gagaagtttgaaaaactaaaaaagctacggaaagctcagagggacttaccggttgcaaag
tttagaagtgatatagtaaaagcggtgcagaatgaaaaagttgttgttgttgctggagac
actggttgtggtaaatcaacccaagtaccacaatatctacatgaagctggatttcaaaat
attgcatgcacacaacccagaaggattgcatgtatctccttatcaaagagggtggcttat
gaaatgcttgctcaatatgaaacaaaagtcggttatcaaattagatttgaaaagagcaag
actgctgatactagcatttgttttataacagagggacttttattgcgacagatgtcgtcg
gagaatttgccgaactacgatgttataatcctagacgaaatacacgaacgacatttaatg
ggcgattttcttttgggcgtgcttaaatgcctcatacacacgcgcactgatattaaactt
gttcttatgtcagctacaatcaatataaaactctttgaagactatttcagtgctgaatct
gctgttgttattcaagtaccaggcaggttatttccaattcaactgcactataagccgata
ttaatcgaagataaacccacaagagatgatcgtctcgacccacagccgtacgtccagatt
atgcatatgatagacaacaaatttccaagtgatgaaagaggcgacctattaatattcatg
tccggagtgcaagaaattacatctatttgtgatgcggctcaacagtatgcggaaaagaat
aaaaattggatagttctgcctttacatagtggactgtcgttggttgaacaagataaggta
tttgattaccctccggaaggagtgcggaagtgcataatatctacgaacatagctgaaaca
tcagtcaccatagatggtatacgtttcgttgttgattctggaaaggtaaaagaaatgagt
tatgattcgtcaactaaaatgcagagattaaaagaattttggatttccaaagcaagtgct
gatcagagaaaagggagggcaggaagaacgggtccgggagtctgctatcgtatatacgcc
gagcagcagtacacagatatggatgccttcagtacacctgaagtgtccagggttcctttg
gcgtctttactgcttctcatgagctccttgggggttaacgatgttaggcggtttccattt
atagacacacctccagaagatgcaatcgaaaatgctttattggagttgaagcaacatggg
gccctaacgtcaaatgaaaaactaacaccactaggcaaagctttagcgaacttaccagtg
gaggtgtctttggctaaagctttagtgataggaagtgccaccttaccacccaataagttg
gactctgcgcttgcgttgactgcggctttggggatacgctctatttttacgacacgtgcg
catcgtgactttgagtgcgagaattccagaaaaccagacgaatcggatcacggtgatcca
ataacgctagtatcgttatactgtgcgtggttgaaggagaaatgtaagggtggggggcga
gcctggtgtagacgtcggggcatagaggagcaaagattgtacgagctgactaaactagct
gctcaactgaaagcattgttgcaggataacaacctaatggaggctcccgaaacagaatca
atgacatctactgaaagagcgatgcgacacggacagatgaaacaattaaaagatatgagg
agacagtataagcaaaaagcggctgaagactcaaagaaacgaaagcgcttaaaagttgac
tcctgggaaatagttgacgataaagatgacaacagtatagatataagggatattgagttt
cgattgagtaatgatgcaaatagaatacaatctttgattaatgggtccagtacgtccagt
gggagggacctggctatgttgaagattgtgctatgtcgtgccctgtacccacaaatagca
gttgccgatgagttcaatcattgcaagtcagtttccgaacaattataccatacttggagt
aaaccgttcgtatttcttcacccgacgtcatactttggcaagcaaggccgagtgcttcaa
ctagtcgaggaggacatacaaacagatatacttgggtttaaaagcaagctccccgtttca
tcgagacatcagatattatgctatttatccttactagaaacgactaagccatatatagtg
aattcaatgcgtatgccggctgcgcagacgctgttattactcgcccatactattgatact
aattttggattttcaagaataatatgcgattcgtggctgttattggagtttccgtaccct
gacactggcttgaaattactatacaaagcaacaaaattgagacaaagatgggatgcgtta
ataaatagacggttattagatgcaaacccaaataaatcagtggaaagtgaattagaaaaa
aataaacctaggctctcgtatgacgaaattcagtacgaattgtctaaggattttagttcg
tatctaaacagcgatgtttgttatacgataaaaaggcttttgccagcggatctaaaggct
ctatacaattgtgaggaacaagccaatgtggaccctaatccgtttgatttagagttcaaa
tgtcgacctcatgacaagaagggtggagtttatatcacggataatgtggtgtttaattgt
gtcgtggattccgattggagctacaactcttaccaagaaacatattcaataccgtggaat
tgtccgaattgcggcataactgtgtgtctgtctcctttagaacgactacagcacaccgaa
ttcacatgttccgtgaaagaagagaaagagataaaaccaattgtaaagcaaaataaaccc
aatggaacagaatataaatgtgagaattgtaaagagatattgtatatgacacccgttgaa
atattgaggcataaaaagagttgtagataa
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