Pandoraea pnomenusa: X636_06080
Help
Entry
X636_06080 CDS
T02950
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
prb
Pandoraea pnomenusa
Brite
KEGG Orthology (KO) [BR:
prb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prb03009
]
X636_06080
Enzymes [BR:
prb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
X636_06080
Ribosome biogenesis [BR:
prb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
X636_06080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHB75060
UniProt:
A0A856LRK5
LinkDB
All DBs
Position
complement(4400063..4401067)
Genome browser
AA seq
334 aa
AA seq
DB search
MNELGKSRQKMVSPASAPQVRLVEVDDGSAGQRIDNFLLRECKGVPKSHVYRILRSGEVR
VNKGRVDAAYRLVLGDIVRIPPVRVATPVADAAVHVPAATFPVLFEDDYLLAIDKPAGVA
VHGGSGVSFGVIEQLRRALPHLKFLELVHRLDRETSGILLLAKKRAALVGMHEQIRHNRM
DKRYLACVTGEWRDRQRAVKAPLYKYVTAEGERRVRVQEDGQASHTVFRMMESLPPYTLL
EAELKTGRTHQIRVHLAHCGTPIVGDDKYGDFTLNKTLARPGSRPGIKRMFLHAWRLKFT
HPVLDTPIALEAALPPECEQFLNQLRGASADAKL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttaggcaaaagtcggcagaaaatggtttcgccggcgtccgcaccgcaggtc
cgcctcgtcgaagtcgacgacggctcggccgggcagcgtatcgataatttcctcttgcgc
gagtgcaaaggagtcccgaaaagccacgtctaccgcatcctgcgtagcggggaagtccgc
gtcaacaaggggcgggtagacgccgcctatcgactcgtccttggcgatatcgtgcggatt
ccgccggtcagggtcgccacgccggtcgccgacgcggccgtccacgtaccggccgccacg
tttcccgtgttgttcgaagacgactacctgctggcaatcgacaagcccgccggcgtggcc
gttcacggcggcagcggcgtctcgttcggcgtgatcgagcaactgcgtcgtgccctgccg
catctgaaattcctcgagttggtgcatcgtctggatcgcgagacatccggcattctgctg
ctggcgaaaaagcgcgcggcactggtcggcatgcacgagcagatccgccacaaccggatg
gacaagcgttatctggcgtgcgtgaccggcgaatggcgcgatcggcaacgtgcggtcaag
gcaccgctatataaatatgtgacggcggaaggggagcgtcgtgtccgggtgcaggaagat
ggccaggcgtcccatacggtatttcggatgatggaatccctgccgccatacacgttgctc
gaagcggaactgaaaacgggacgcacccatcagattcgcgttcacctcgcgcattgcggc
acgcccattgtcggggacgacaaatatggcgacttcacgctgaacaagacgctggcgcgc
ccggggagccggcccggcatcaagcggatgtttttgcatgcatggcgattgaaattcacc
catccggtgcttgacacgccgattgcactggaagccgcgttgccgccagaatgtgagcaa
ttcctgaatcaacttcgaggcgcttccgccgatgccaagctctga
DBGET
integrated database retrieval system
