Pradoshia sp. D12: F7984_13180
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Entry
F7984_13180 CDS
T06218
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
prd
Pradoshia sp. D12
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
PAS_8
HTH_8
AAA
AAA_2
AAA_5
PAS_10
PAS_7
Mg_chelatase
PglD_N
DapB_N
AAA_16
AAA_3
NAD_binding_7
HTH_50
MurD-like_N
GFO_IDH_MocA
GdpP_PAS
DUF815
Motif
Other DBs
NCBI-ProteinID:
QFK72120
UniProt:
A0A5J6XR42
LinkDB
All DBs
Position
complement(2754277..2756340)
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AA seq
687 aa
AA seq
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MQTVLIIGAGTGGLSILKILLEAKDYQVIGVVDRHSSAVGLQLAEQNHIKTGSDWVDFIT
DGSDIIFEVTGDEQVYQDIARHKSNHTLLVHGQIAFLLANLIQEKESLIRKSKEEAYLHE
LVLNATDNGMVLINTEEKIIFFNQAAATITGVPRKQAIGQHIHRVIPASRLPEILKTRKT
ESNQRAHLDKNLDVVTTRMPIKNEEGGLLGALAVFKGITEFTSLAEEITNLKHIQNMLEA
IIHSSEDAITVVDEDGNGILINPAYTRITGLTEEDVLGKPATADITEGKSMHMQVLKTKK
PVRGVRMKVGASNRDVVVNVAPIMVNGYLKGSVGVIHDLSEIQSLTQELKRARQIIRNLE
AKYTFDDIIGQSKEMKLALEQARLCARTPVTVLLRGESGTGKELFAHAIHNASDRKYNKF
IRVNCAAISESLLESELFGYEDGAFSGAKRGGKRGLFEEANNGSIFLDEIGELSQNMQAK
LLRVLQENEIVRVGGTKPISIDVRVITATNVNLEKAIAKGNFREDLYYRINRMPIYIEPL
RERKEDIPPLCVHLIKKLNLEYGRSIEDISGEALIMLQEYDWTGNVREIENILGRAIIFM
DQHEKIIQKRHLPEKLLKAAEGSPNHTIEKRSTINDKQSLADQLDEVEKSIIMRSLEKHN
GNKTAASRDLGLSIRNFYYKLQKFSLE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaacagttttgattattggggcgggcactggagggctatccattttaaaaatctta
cttgaggcaaaggattatcaggttataggagtggtggatcgtcattcgagtgcagtggga
cttcaattagctgaacaaaatcatataaaaacaggtagtgattgggtagattttatcact
gatggctcggatatcatttttgaagtgacaggggatgagcaagtttaccaggatatagcc
cgccataaaagtaatcacactcttttagttcacgggcagattgcctttctgttagccaat
ctgattcaagagaaagaaagtttaatcaggaagtcgaaagaagaggcttatttacatgaa
ttagttttgaatgcgaccgataacgggatggtacttataaatacagaagagaaaataatc
ttttttaatcaggctgcagcaacgattacgggtgtccccagaaaacaagcaatcggtcag
cacatacatagagttattcctgcgtcccgtcttcctgaaatcctcaaaacaagaaaaacg
gagagcaatcaacgggctcatttggataaaaatttagatgtggtaacaaccagaatgcct
atcaagaatgaagaaggcggtttactgggagctttggccgttttcaaaggaatcacggaa
tttacaagcttagcagaggaaattacaaatttaaagcatattcaaaacatgctcgaagct
attattcattcgagtgaagatgccataactgtagtggatgaggatgggaatggaatctta
attaatcctgcgtataccagaattaccgggttgaccgaagaggatgtcctgggcaaacct
gctacggcagatattacagaaggtaaaagtatgcatatgcaggttttgaaaacaaaaaaa
cctgtccgaggcgtacgaatgaaggtgggggcatcgaaccgggatgtggtggttaatgta
gcaccgattatggtgaatggttatttgaagggaagcgttggcgtcattcatgacctttct
gaaatacaaagcctgacacaggaattgaaaagggcgagacaaatcattcgtaatctagaa
gctaaatatacatttgacgatattattggccaatctaaagagatgaaattggcattggag
caggcccgtttatgcgcccgtacgccagttaccgtattattgaggggtgaatcgggtaca
ggcaaggaactattcgcccatgcaatccataatgccagtgatcgaaaatataataaattc
atccgcgtgaattgcgcagcgatatcggagtcgcttttagagagtgagttatttggctac
gaagatggagctttttcaggtgcaaagcgtggcggtaaacgaggactgtttgaagaagcc
aataatggcagcatatttcttgatgaaattggtgagctttctcaaaatatgcaggcgaag
cttcttcgcgttttgcaggagaatgaaatagttcgtgtaggaggaaccaagcctatttcc
attgatgtgcgtgtgataacagcgaccaatgtcaatcttgagaaagcgattgcaaaagga
aacttcagagaagatttatattaccgaattaacagaatgcctatatatattgagccttta
agggaacgtaaggaagatattcccccattatgcgtccacttaatcaaaaagttgaatttg
gagtatggccgaagtattgaggatataagcggtgaggcactcatcatgcttcaggaatat
gattggactggaaatgtaagggaaatagagaatatattagggagagccataatttttatg
gatcagcatgaaaaaattatacaaaagaggcatttacctgaaaaattattgaaggctgca
gaaggttctcctaaccatacaatcgaaaaaagatcaacaataaatgataaacaaagttta
gcggatcaattggatgaagtggagaaaagcattattatgcgttctttagaaaagcataat
gggaataaaactgctgccagccgtgatctaggtttgtctattcgtaatttttattataaa
ttgcaaaagtttagtcttgaataa
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