Poecilia reticulata (guppy): 103457458
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Entry
103457458 CDS
T05149
Name
(RefSeq) single-minded homolog 1-like isoform X1
KO
K09100
single-minded
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103457458
Transcription factors [BR:
pret03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103457458
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIM_C
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
103457458
NCBI-ProteinID:
XP_008395817
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Position
LG21:10184664..10194949
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AA seq
763 aa
AA seq
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MKEKSKTAARTRREKENSEFYELAKMLPLPSAITSQLDKASIIRLTTSYLKMRIVFPQGL
GEAWGHTSRTRSLDNLGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
GNSIYEYVHPADHDEMTAVLTPHQPYHSHFVQEYEVERSFFLRMKCVLAKRNAGLTSGGY
KVIHCSGYLKIRQYSLDMSPFEGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
KLIFLDSRVAELTGYEPQDLIEKTLYHHVHSCDIFHLRCAHHLLLVKGQVTTKYYRFLAK
HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGMQLSLDQMSPTKPAFPYADSH
SEERKTSKSRLTQSKAKSRVSPYPQQFAAFNPERSESDQDSQWGGSPLTDSASPQLLDPS
EAAEASCAYRLYPDSGSLCYGLGLSEDDLTHTHTQAHPHTTTCDRVRCQGGRYFLGTPQS
GREMWWDTTRSVLSLPKFSVDNSEGYEITSYHGAIHGRGHWDEDSVVSSPDGGGSTSDSG
ERYHGDQFQSSPREPSKMETLIRATQQMIKEEENRLQQQKVLLDVSGLTKTHSPCFAASI
PHHSQLTMPSVVCRGPGAPSIDLPSERLHHRDSVKALGSHDNDENTTSPVSVSRLSSPGS
DGVPRPGLPLTKDYMPTDLSPHPAQAHSSPLLYPAQERQQMERQAAYALTGYSLEHLYDP
ENLRSYSSLACGGVQYDVASHVRMQAEQMQGHKATSVIITNGS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaaatccaagacggccgcaaggactagacgagaaaaagagaacagcgaattt
tatgaactggctaaaatgctccctcttccgtcggccattacctcccagctcgacaaagcc
tccataatacggctgacaacaagctacctaaagatgaggattgttttcccgcagggtctt
ggtgaggcgtggggacacacgagtcgaacaagatctttggacaatctcggacgggagctc
ggatctcatttattgcagacgttagatggattcatattcgtggtggctccggatgggaag
attatgtacatctcagagacagcgtcggtccatttaggactgtctcaggtagagttgacc
gggaacagcatttatgaatatgtccatcctgccgaccatgatgaaatgactgccgtgctg
acgccacatcagccctatcactctcattttgtacaagaatatgaagtggaacgttctttc
tttttgaggatgaaatgtgtgctggcaaaaagaaatgctggactaaccagtggaggatac
aaggtcatccactgcagtggctacctgaagatccgtcagtacagtctggacatgtcgccg
tttgagggctgctaccagaatgtgggactggtggctgtgggtcactctctgccgcccagc
gctgtgacggaaataaaactgcacagcaacatgtttatgttcagggccagtctggacatg
aagctcatttttctggactcaagggtagctgagctgacgggttatgagccccaggacctt
atagagaaaacattataccatcatgtccacagctgcgatatttttcacctccgctgtgct
catcacctcttgctggtaaaaggccaggtcacgactaagtattaccgtttccttgccaag
cacggtggctgggtctgggtccagagttacgccaccattgtccacaacagccgctcttcg
aggcctcattgcatcgtcagtgtcaactacgttctcacggacaccgagtataaaggaatg
caactttccttggaccaaatgagccctactaaaccggccttcccttatgctgacagtcac
agtgaggaaagaaaaacatccaagtcccgtctgacccagtcgaaggcaaaatctagagta
tcgccctatccacagcaatttgcagcttttaatccagagcgttcagaatctgaccaagac
agtcagtggggggggagccccctgacagactcggcctcgcctcagttgctggatccgagt
gaggctgcagaggcatcttgcgcctatagactgtatccagactccggatccctgtgctac
ggtctgggtttatctgaagatgatctcacccacacccacacccaagctcaccctcacacc
accacctgcgaccgtgtccgatgccaaggaggccgttatttcctgggaacccctcagtcg
ggtcgagagatgtggtgggacaccacgcgttctgtgctgtcacttccaaaattctctgtg
gacaacagtgagggctatgaaatcacatcctaccatggcgccattcatggacggggccac
tgggatgaagacagtgttgtgagttcgcctgatggaggtgggtccaccagcgactcgggt
gagcgttatcatggtgaccagttccaatcaagtcctcgagaaccaagcaagatggagacc
ctgatccgagccacacagcaaatgattaaagaggaagagaatcgcttgcagcagcagaag
gtgctgctggatgtttcaggtctcaccaaaactcacagtccgtgcttcgccgcctccata
ccccatcattctcagctcaccatgcccagcgtggtgtgtcgtggtcctggggctcccagc
atcgacctcccgtcagagcgcctgcatcaccgggacagcgtcaaagcgctcggctcccac
gacaatgatgaaaacacaaccagccccgtgtcggtgtctcgcctcagcagccccggctcg
gacggcgtccccaggcctggcctccctctaaccaaagactacatgccgacagatttgtca
ccacaccctgcacaagcccacagtagtccgctgctctatccggcccaggagaggcagcag
atggaaaggcaggcggcttatgctttgaccgggtactccctggagcacctgtacgaccca
gagaacttgcggagttattcaagcctggcatgtggaggagtccagtatgacgtggcgtct
catgtgaggatgcaggcagagcagatgcaaggacacaaggccacctcagttatcattacc
aacggcagctga
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