Poecilia reticulata (guppy): 103462988
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Entry
103462988 CDS
T05149
Name
(RefSeq) nuclear receptor ROR-alpha-like isoform X2
KO
K08532
RAR-related orphan receptor alpha
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103462988
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pret03310
]
103462988
Transcription factors [BR:
pret03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103462988
Nuclear receptors [BR:
pret03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
103462988
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103462988
NCBI-ProteinID:
XP_008404296
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All DBs
Position
LG3:complement(32298669..32348553)
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AA seq
541 aa
AA seq
DB search
MESSRQDSVTDAVRSRSQPGEAAAETPLPAAGRTHCRSDSSGSSQSKGLSAAVKKTHASQ
IEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNASYSCPRQKNCQIDRTSRNRCQH
CRLQKCLAAGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQAPSRSSPSVGSPSPDEA
ESPSPPYTLCSAGLTDPADDPACYADRTSPDGGSLTSKAESGAGDAGCGGFYLDIQPSPD
QSGLDINGIKPEPLYDYGHGDDFFPYCSFSNGDASPTLTLAEHDHLAQIICKSHLETCQY
LREELQEMSWQSFLQEEVEKYQNKPQEAMWQLCAVKITDAVQYVVEFAKRIDGFMDLCQN
DQIVLLKAGSLEVIFVRMCRVFDSQNNAVFFDGKFASPDVFKSLGCDDLISSVFDFAQSM
CSLQLTEEEIALFSAFVLLSADRSWLREKLQVEKLQRKTESALQHVLQKNRRDDGVLEKL
RCKTSALRALCGLHSEKLAAFRTVYPDAVRTLFPPLYKELFAADLDGTLHRAPEPVRSQQ
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtcccgacaggattcggtgactgacgcggtaaggagtcgctcgcagcccggg
gaagccgccgcggagaccccgctccccgcagcgggcaggacgcactgccgctccgactcc
tccgggtccagtcaaagcaaaggtttgtcagcagctgtgaagaagacgcacgcttctcag
attgagatcatcccctgtaagatctgtggagataaatcctcagggatccactacggcgtc
atcacctgcgagggctgcaagggtttcttcaggcggagtcagcagagcaacgcctcgtac
tcgtgtccacggcagaaaaactgtcagatcgaccgaacgagccggaaccggtgccagcac
tgccgcctgcagaaatgcctggctgccggcatgtccagagacgccgtgaagttcggccgc
atgtcgaagaagcagcgggacagtttgtacgccgaggtccagaagcaccggctccagcag
cagcagcaggcgcccagccggtcctcccccagcgtcggcagccccagcccggacgaggct
gagtcgccgtctcccccgtacacgctgtgctccgcgggcctcacggacccagcagacgac
ccggcctgctacgcggaccggacctcaccagacggaggatctctgacttccaaggcggag
tcgggagcaggagacgcaggatgtggaggtttctacctggacatccagccgtctccggac
cagtccggactcgacatcaacggaatcaaaccggagccgctgtacgactacggacacggc
gacgacttcttcccttactgctccttcagcaacggagatgcttctccaaccctgaccttg
gccgaacacgatcacttggcccaaatcatctgcaagtctcacctggagacgtgtcagtac
ctgagggaggagctgcaggaaatgagctggcagagtttcctgcaggaagaggtggagaag
tatcagaacaagccacaggaggcgatgtggcagctttgtgcggtgaagatcacagacgcc
gtccagtacgtggtggagttcgccaagcgcatcgacggcttcatggatctctgccagaac
gaccagatcgtgctgctgaaagccggatctttagaggtcatcttcgtacgaatgtgtcgg
gtttttgactctcagaacaacgccgtcttcttcgatgggaaatttgcaagtcctgacgtt
ttcaaatcattaggctgcgacgatttgatctcgtcggtgtttgacttcgctcagagcatg
tgttcgctgcagctgaccgaggaagagatcgccctcttctccgcgttcgttctgctctct
gcagaccggtcgtggctgcgggagaagctgcaggtggagaagctgcagcggaaaaccgag
tcggccctgcagcacgtcctgcagaagaaccgcagagacgacggagttctggagaagctg
cggtgcaagacgtcggcgctgcgcgcgctctgcggcctccactcggagaagctggcggcg
ttcagaaccgtctacccggacgcggtccggacgctcttccctccgctctacaaggagctg
tttgctgccgacctggacgggactctgcaccgggcgccagaaccggtccggtcccagcag
gactaa
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