Poecilia reticulata (guppy): 103468405
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Entry
103468405 CDS
T05149
Symbol
ddx47
Name
(RefSeq) probable ATP-dependent RNA helicase DDX47
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pret03009
]
103468405 (ddx47)
Enzymes [BR:
pret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103468405 (ddx47)
Ribosome biogenesis [BR:
pret03009
]
Eukaryotic type
90S particles
Helicases
103468405 (ddx47)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
SWI2_SNF2
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
103468405
NCBI-ProteinID:
XP_008413691
UniProt:
A0A3P9PMT9
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Position
LG8:7363469..7370418
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AA seq
499 aa
AA seq
DB search
MLWVRVSAAAQFRREDTLGRGSMEDRSPEQNTGVRPEESGSDDDEEQVNTGGSEEAVKTF
KDLGVTEVLCEACDQLGWKSPTKIQVEAIPVALQGRDVIGLAETGSGKTGAFALPILQSL
LASPQRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAKKPHVV
IATPGRLIDHLENTKGFSLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRRTFLFSA
TMTKKVQKLQRAALKDPVKCAVSTKYSTVDKLQQYYVFIPSKYKDCYLVSILNELAGNSF
MIFCSTCNNAQRVALMLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLATDVASRG
LDIPHVDCVINYDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIESLIGKKL
PAFPTQEEEVMMLVERVSEAQRFARLEMKEQGEKRRRPKGGDGDGDEDDTEQASGVRKKV
KGGPGGGKKRGGAAWRGGR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgctttgggttcgcgtttccgcagctgcgcagtttagacgggaagacacgttgggacgg
ggaagcatggaggaccggagtccggagcaaaataccggtgtaaggccggaggagtctgga
agcgacgatgatgaagaacaggttaatactggaggaagtgaggaggcggtgaagaccttc
aaggatctgggcgttaccgaggttctctgtgaagcttgtgatcagttgggatggaagagt
ccaaccaagatccaggtggaagctattccagtagcacttcaaggcagagatgtcatcggc
ttggcagagacaggttcgggtaagaccggtgcgttcgctctgcccatcctccagtctctg
ctggcttcacctcagcggctccacaccctggtcctcacccccaccagagagctggccttc
cagatctctgagcagtttgaggctctgggctccagcattggggtcaaatgtgctgtgatt
gttggaggaatcgacatgatgtcccagtcgttggtgttggcaaaaaagccacatgttgtt
attgccactcctggtcggctgatcgaccacctggagaacacaaagggcttctccctgcga
gctctgaagttcctggtcatggacgaagcagaccggattctcaatatggactttgagact
gaggtggacaagatcctgaaagtcattcccagagacagacgtaccttcctgttctcggcc
accatgaccaaaaaagtccagaagctccaaagagcagctctgaaggatcctgtaaagtgc
gccgtatccacaaagtactccacagtagacaagctgcagcagtactacgtctttattcca
tccaagtacaaggactgttacctcgtgtccatcctgaacgagctggccgggaactccttc
atgattttctgtagcacttgtaacaacgcccagcgggtggcgctcatgttgaggaacctg
ggcatcaccgccatccctcttcacggacagatgagtcagaataaacgtctcggcgcgctc
aacaagttcaagtccaagtcgcgctccgttctcctggcaacggatgtggcgtccagaggc
ctggacatcccgcacgtcgactgcgtcatcaactacgacatccctacgcattcaaaggac
tacatccacagagtggggcgaacagccagagcggggcggtctgggaaatccatcactttt
gtcacacagtatgatgtggagcttttccagcggatcgaaagtttgatcgggaagaagctg
ccggcgtttcccacacaagaggaggaagtgatgatgctggtggagagagtgagcgaggct
cagagatttgcccggctggaaatgaaggaacagggagagaaacggaggaggcccaaaggt
ggagacggagacggggacgaggacgacacggaacaggcgagcggagtgaggaagaaagtc
aagggagggccgggcggagggaagaagaggggcggtgcagcctggagaggaggacgctga
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