Poecilia reticulata (guppy): 103468471
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Entry
103468471 CDS
T05149
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103468471 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pret03021
]
103468471 (cpsf4)
03019 Messenger RNA biogenesis [BR:
pret03019
]
103468471 (cpsf4)
Transcription machinery [BR:
pret03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103468471 (cpsf4)
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103468471 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
103468471
NCBI-ProteinID:
XP_008413802
UniProt:
A0A3P9PY91
LinkDB
All DBs
Position
LG8:8670598..8674755
Genome browser
AA seq
262 aa
AA seq
DB search
MQELLANVDHIKFDLEFAVEQQLGAQPLPFPGMDKSGSAVCEFFMRGACMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKACKFMHPRFELPMSEQPPLP
QQAQIQTKAASVNRSSLSLIQLTNTSPIQRPQNNINSGVQQNHMSVNRGPRPLDQVTCYK
CGEKGHYANKCNKGHLAFLSGQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttactggccaacgtggatcacatcaagtttgacctggagtttgctgtggag
cagcagctcggagcacagcctctgcctttccctggcatggataagtccgggtcagctgtg
tgcgagttcttcatgaggggagcttgtatgaaaggcgggatgtgtccgttccgtcacatc
agcggagagaagacggtggtgtgtaaacactggctcagaggcctgtgcaagaagggagac
cagtgcgagtttctccacgagtacgacatgaccaagatgcccgaatgctacttctactcg
aaattcggagagtgtagcaacaaggagtgtcccttcctgcacatcgatccggagtcgaag
atcaaagactgtccgtggtacgaccgaggattctgtaaacacggtcccgactgcagacac
agacacacacggcgggtaatctgtgtaaactacctggtgggcttctgtcctgaagggaaa
gcctgtaaatttatgcaccctcggtttgagctgccaatgtccgaacagcctcctcttcca
caacaagcacaaattcagaccaaggctgcgtctgtcaaccgctcatcrctctctctcatc
cagctgaccaacaccagccccatccagcggccgcagaacaacataaactctggagtccag
cagaaccacatgtccgtcaacagagggcctcggcctctggaccaggtcacctgctacaag
tgtggagagaagggccactacgccaacaaatgtaataagggtcacctcgccttcctgagc
ggacagtag
DBGET
integrated database retrieval system
