Poecilia reticulata (guppy): 103477393
Help
Entry
103477393 CDS
T05149
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret04010
MAPK signaling pathway
pret04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103477393 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
103477393 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pret03000
]
103477393 (nfkb2)
Transcription factors [BR:
pret03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
103477393 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
103477393
NCBI-ProteinID:
XP_008428712
LinkDB
All DBs
Position
LG15:30148407..30162542
Genome browser
AA seq
910 aa
AA seq
DB search
MISYEKLLIKEKPGRRKIQSSSSSPPDMAGALRMTEPQFVNYGDDNMQLANFLPYDFIPP
MEIKTEPYIPETAHGPYVQIIEEPKQRGFRFRYECEGPSHGGLPGASSEKNRRTYPTVKI
NNYVGHARVEVQLVTHTDPARVHAHSLVGRHCNENGTCSLDIGPNDLTASFSNLGILHVT
KKGVVEVLTRRLRDERRRQKGTHCPFTDGEESSILKEAKELGKVMDLNIVRLRFTAFLQD
SNGGFTRALKPVVSNPIYDSKSPNASNLKISRMDKTCGSVLGGDEIFLLCDKVQKDDIEI
RFYEEDEDGCWEAFGDFSPTDVHKQYAIVFKTPPYHSAEIDRPVTVFLQLRRKKAGDSSD
PKQFTYVPQVQDKEEVLRKKQKPLPHYDSWRGGRGRDGGPGAGGFGSGPGGPGFQFSQMN
GGPGGGAFYTGAFTGFTAGGGAQMSGSAPPTSGPAPQQGEGQPGSAVQQQLLRIAASLSS
RASQSARQTAAALLQYCSTGDARVLLALQRHLCGIQDANGDTPLHLAIIHQQTAVIQQLV
QTLLSSQQHAVLNTCNHLQQTPLHLAVITRQLKVLEVLLRAGADPTLVDKDGRSPLHLAA
LAGDTATLRLLLAHLGERHAHLVNTPDYHGLQPLHLAVRRDGERCLRLLVEGGAKINAAE
LKSGNTPLHLAVRENLFKVACTLITELKAEVNTCTFGGNTPLHLAASLGFPTLCSMLIAA
GADKTMENDEPLYFSSSDEEAEPDEPIGSRKRRARGHTPLDLATCQKVRNLLASRRSPKP
SRHADKKIRTGSEDGERSGLDEETLSRLVAVLSVGDVPWVKLAEKLGMMTLTHLYEDSAT
PCQHLLQHYKLGGGPVEGLVEALQALGLTEGVRLLRNTELRDDKHSSDATVDSGFSSQPM
EEQQEAMTNE
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgattagttatgagaagttattgattaaggaaaaacccggcaggaggaagatccagtcc
tcctcttcctcacctccagacatggccggagcgctcaggatgactgaacctcagttcgtg
aactacggagacgacaacatgcagttagcaaacttcctcccctatgacttcattcctccg
atggagatcaagacggagccgtacatacctgagacagctcacggtccgtacgtccagatc
atcgaggaaccaaaacagagggggttccggttccgttacgagtgcgagggcccgtcccac
ggcgggttgccgggggcgtccagcgagaagaaccggcggacttacccgaccgtgaagatc
aacaactacgtgggccacgcccgggtggaggtccagctggtgacccacaccgacccggcc
cgggtccacgctcacagcctggtgggacgccactgcaacgagaacgggacctgcagcctg
gacatcggacccaacgacctgaccgcctcgttcagcaacctgggaatcctccatgtgacc
aagaagggcgtggtcgaggttctgacccgacggctccgagacgagaggcggagacagaaa
ggaactcactgtccgttcacagacggcgaggagtcgtccatcttgaaggaggccaaggag
ctggggaaggtgatggacctgaacatcgtccgtctccgcttcaccgccttcctgcaggac
agcaacggcggcttcaccagggcgctcaaacccgtggtgtccaatcccatctacgacagc
aagtctcccaacgcgtccaacctgaagatctcgcgcatggacaagacgtgcggatcggtg
ctgggaggagacgagatcttcctgctgtgtgacaaagtccagaaagacgacatcgagatc
cgtttctatgaggaagacgaggacggatgctgggaggccttcggggacttctctccaacc
gacgtccacaagcagtacgccatcgtgttcaagacgccgccgtaccacagcgccgagatc
gaccggccggtcaccgtcttcctgcagctgcgccgcaagaaggccggcgacagcagcgac
cccaagcagttcacctacgtcccgcaggtccaagacaaagaggaagtcctgaggaagaag
cagaagccgctgccgcactacgactcctggagaggagggcgagggcgcgacggagggccc
ggggccggcggcttcggatcaggacccggaggaccaggtttccagttctcccagatgaac
ggaggaccaggaggcggagctttctacaccggagccttcacaggcttcaccgcaggggga
ggagcccagatgtcaggctccgcccctccgacgtcaggccccgccccccagcagggggag
ggccagccaggctccgctgtgcagcagcagctgcttcggatcgccgcctccctcagcagc
cgggcgtcgcagagcgcccggcagacggccgccgccctgctgcagtactgcagcaccgga
gacgcccgcgtcctgctggcgctgcagagacacctgtgtggcatccaggacgccaacgga
gacacgccgctgcacctggccatcatccaccagcagacggccgtcatccagcagctggtc
cagacgctgctgagcagccagcagcacgccgtgctcaacacctgcaaccacctgcagcag
acgccgctccacctggcggtcatcacgcggcagctgaaggtcttggaggtgctgctgcgg
gcgggggccgaccccaccctggtggacaaagatggccgcagcccgcttcacctggctgcg
ctggccggagacacggccacgctgcgcctcctgctggcccacctgggagaacgccacgca
cacctggtgaacacgccggactaccacggtctgcagccgcttcacctggccgtcaggagg
gacggcgagcgctgcctccgcctgctggtagagggcggagccaagatcaacgctgccgag
ctgaagagcgggaacacgccgctgcacctggccgtcagagagaacctgttcaaagtggcc
tgcacgctcatcacagagctgaaggccgaagtcaacacctgcaccttcggaggaaacacg
ccgctgcacctggcagccagcctggggttccccacactctgctccatgctgatcgctgca
ggtgctgataagaccatggagaacgacgagccgctgtacttcagctcgtcagacgaggag
gcagaaccagacgaaccaatcggcagccggaagaggcgggccagaggccacacccccctg
gacctggccacctgtcagaaggtgaggaacctgctggcctccaggcggagccccaagccc
agtcgccacgccgacaagaagatccggactggcagcgaagacggcgagcggtcgggattg
gacgaggagacgctgagccggctggtggcggtgctgagcgtcggcgacgttccctgggtg
aagctggcggagaagctgggcatgatgacgctgacgcacctgtacgaggacagcgccacg
ccctgccagcacctgctacagcactacaagctgggtggaggtccagttgaaggcctggtg
gaggcgctgcaggctcttggtctgacagagggagtccggctgctgaggaacacggagctg
cgagacgacaagcacagctcagacgccacggtggacagcggcttcagcagccagccaatg
gaggagcagcaggaggcgatgaccaatgaatga
DBGET
integrated database retrieval system
