KEGG   Providencia rettgeri: RB151_037530
Entry
RB151_037530      CDS       T04571                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
prg  Providencia rettgeri
Pathway
prg02020  Two-component system
prg02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:prg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RB151_037530 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RB151_037530 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prg03021]
    RB151_037530 (rpoN)
Transcription machinery [BR:prg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RB151_037530 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID SHNi-TPR
Other DBs
NCBI-ProteinID: APC13401
UniProt: A0A1J0EC66
LinkDB
Position
4027574..4029019
AA seq 481 aa
MKQSLQLRVSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALETNPLLEQEELNSETESIE
SLSDNTDSSELDTKDALENQDMPNELPLDADWDEIYTAGTPSGTTNDYSYDELPVYQGET
TQTLQDYLIWQSELTPFTDTDRAIATSIIDSIDDSGYLTTTISDIHEGIANPEISLEEVV
AVLKRIQHFDPLGVAAQDLKECLLIQLSLYPKETNGLQEAKLIISNHIDLLANRDFRQLS
KLTRLKEDALKTAIDLILTLNPKPGQSINTGESEYVIPDVLVKKIAGHWQVELNTDSIPK
LSINNHYASMANNSANEGDTQYIRSHLQEAKWLIKSLESRHETLLKVATCIVEQQQEFFE
LGEEYMKPMILADIAYQVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVSTDTGGEAS
STAIRALVKKLVAAENPAKPLSDSKLTSMLAEQGIQVARRTVAKYRESLSIPPSNQRKQL
V
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgaagcaaagtttgcagcttagagttagtcaacaacttgcaatgacaccccaattgcag
caggctattcgcctgttgcaactgtctacacttgagctgcaacaagaaatccaactagcg
ttagaaactaacccgcttcttgaacaagaagaattaaattctgaaaccgaatctattgaa
tctctgagtgataatactgacagcagtgaacttgataccaaagacgcacttgaaaaccaa
gacatgcctaatgagcttcctttggatgctgattgggatgaaatctacacagcgggtacg
ccttcaggcaccactaatgattacagttatgatgaattacccgtttatcaaggtgaaacc
acacagactttacaagattacctaatatggcagtctgagctgacgccctttactgataca
gaccgtgcgatagccacctcaattattgattcaattgatgattcaggttatctcaccact
acaatttctgatatacatgaaggaattgctaaccctgaaattagcttagaagaagttgtc
gctgttttaaaacgaattcaacatttcgacccattaggcgtcgccgctcaagatttaaaa
gaatgtttactgattcagctttcgttataccccaaagaaaccaacgggctacaagaagcc
aaactaattattagcaaccacattgatttgcttgcaaatcgtgactttaggcaactcagt
aaattaacgcgtctaaaagaagatgcgttaaaaaccgccatcgatttgatcttaacgctt
aaccctaaaccaggccaatccattaatactggggaatcagaatacgtaattcctgatgtt
ttagtgaaaaaaatagcaggacactggcaagttgagctaaatacagatagcatccctaaa
ctgagtattaataatcattatgcttctatggctaataattcagcgaatgagggtgacaca
caatatattcgtagccatcttcaagaagcaaaatggttaataaaaagcctagaaagccgt
catgaaacactattaaaagtggcgacttgtattgtggaacagcaacaagaattctttgag
ctgggtgaagagtatatgaaaccaatgatattggctgatattgcctatcaggtcgatatg
cacgaatcaaccatctctcgagtgacaactcaaaagtttctccatagcccgcgaggcatt
tttgagttgaaatattttttctccagccatgtcagtacggatacaggtggcgaagcctcc
tcaaccgcaattcgagcgttggtgaaaaaattggttgctgcagaaaaccctgcaaaacca
ttgagtgacagtaaattgacgagtatgctggccgaacaaggcattcaagtggctcgcaga
actgtcgctaagtatcgtgaatcgttatctattccgccctcaaaccagcgtaaacaactg
gtttaa

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