Providencia rettgeri: RB151_037530
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Entry
RB151_037530 CDS
T04571
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
prg
Providencia rettgeri
Pathway
prg02020
Two-component system
prg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RB151_037530 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RB151_037530 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prg03021
]
RB151_037530 (rpoN)
Transcription machinery [BR:
prg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RB151_037530 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
SHNi-TPR
Motif
Other DBs
NCBI-ProteinID:
APC13401
UniProt:
A0A1J0EC66
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All DBs
Position
4027574..4029019
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AA seq
481 aa
AA seq
DB search
MKQSLQLRVSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALETNPLLEQEELNSETESIE
SLSDNTDSSELDTKDALENQDMPNELPLDADWDEIYTAGTPSGTTNDYSYDELPVYQGET
TQTLQDYLIWQSELTPFTDTDRAIATSIIDSIDDSGYLTTTISDIHEGIANPEISLEEVV
AVLKRIQHFDPLGVAAQDLKECLLIQLSLYPKETNGLQEAKLIISNHIDLLANRDFRQLS
KLTRLKEDALKTAIDLILTLNPKPGQSINTGESEYVIPDVLVKKIAGHWQVELNTDSIPK
LSINNHYASMANNSANEGDTQYIRSHLQEAKWLIKSLESRHETLLKVATCIVEQQQEFFE
LGEEYMKPMILADIAYQVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVSTDTGGEAS
STAIRALVKKLVAAENPAKPLSDSKLTSMLAEQGIQVARRTVAKYRESLSIPPSNQRKQL
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagtttgcagcttagagttagtcaacaacttgcaatgacaccccaattgcag
caggctattcgcctgttgcaactgtctacacttgagctgcaacaagaaatccaactagcg
ttagaaactaacccgcttcttgaacaagaagaattaaattctgaaaccgaatctattgaa
tctctgagtgataatactgacagcagtgaacttgataccaaagacgcacttgaaaaccaa
gacatgcctaatgagcttcctttggatgctgattgggatgaaatctacacagcgggtacg
ccttcaggcaccactaatgattacagttatgatgaattacccgtttatcaaggtgaaacc
acacagactttacaagattacctaatatggcagtctgagctgacgccctttactgataca
gaccgtgcgatagccacctcaattattgattcaattgatgattcaggttatctcaccact
acaatttctgatatacatgaaggaattgctaaccctgaaattagcttagaagaagttgtc
gctgttttaaaacgaattcaacatttcgacccattaggcgtcgccgctcaagatttaaaa
gaatgtttactgattcagctttcgttataccccaaagaaaccaacgggctacaagaagcc
aaactaattattagcaaccacattgatttgcttgcaaatcgtgactttaggcaactcagt
aaattaacgcgtctaaaagaagatgcgttaaaaaccgccatcgatttgatcttaacgctt
aaccctaaaccaggccaatccattaatactggggaatcagaatacgtaattcctgatgtt
ttagtgaaaaaaatagcaggacactggcaagttgagctaaatacagatagcatccctaaa
ctgagtattaataatcattatgcttctatggctaataattcagcgaatgagggtgacaca
caatatattcgtagccatcttcaagaagcaaaatggttaataaaaagcctagaaagccgt
catgaaacactattaaaagtggcgacttgtattgtggaacagcaacaagaattctttgag
ctgggtgaagagtatatgaaaccaatgatattggctgatattgcctatcaggtcgatatg
cacgaatcaaccatctctcgagtgacaactcaaaagtttctccatagcccgcgaggcatt
tttgagttgaaatattttttctccagccatgtcagtacggatacaggtggcgaagcctcc
tcaaccgcaattcgagcgttggtgaaaaaattggttgctgcagaaaaccctgcaaaacca
ttgagtgacagtaaattgacgagtatgctggccgaacaaggcattcaagtggctcgcaga
actgtcgctaagtatcgtgaatcgttatctattccgccctcaaaccagcgtaaacaactg
gtttaa
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